Mp6g20340



Description

Annotation

Database ID Description
Pfam PF05964 F/Y-rich N-terminus
MobiDBLite mobidb-lite consensus disorder prediction
Gene3D G3DSA:2.60.120.650 Cupin
ProSiteProfiles PS51542 FYR domain FYRN motif profile.
Pfam PF02375 jmjN domain
SMART SM00541 fyrn_3
PANTHER PTHR10694 LYSINE-SPECIFIC DEMETHYLASE
ProSiteProfiles PS51543 FYR domain FYRC motif profile.
SMART SM00558 cupin_9
Pfam PF02373 JmjC domain, hydroxylase
ProSiteProfiles PS51184 JmjC domain profile.
ProSiteProfiles PS51183 JmjN domain profile.
SUPERFAMILY SSF51197 Clavaminate synthase-like
Pfam PF02928 C5HC2 zinc finger
SMART SM00545 JmjN_1
Gene3D G3DSA:3.30.160.360 -
SMART SM00542 fyrc_3
Pfam PF05965 F/Y rich C-terminus
KEGG K11446 [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
KOG KOG1246 DNA-binding protein jumonji/RBP2/SMCY, contains JmjC domain; C-term missing; [R]
MapolyID Mapoly0045s0030 -

Nomenclature

Gene symbol Product Transcript ID Status
MpHDM7 Chromatin related protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp6g20340.1 chr6:26444359..26456318 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.