| Database | ID | Description |
|---|---|---|
| Pfam | PF16486 | N-terminal domain of argonaute |
| Gene3D | G3DSA:2.170.260.10 | paz domain |
| ProSiteProfiles | PS50822 | Piwi domain profile. |
| Pfam | PF16488 | Argonaute linker 2 domain |
| Pfam | PF02170 | PAZ domain |
| SMART | SM00950 | Piwi_a_2 |
| CDD | cd02846 | PAZ_argonaute_like |
| Gene3D | G3DSA:3.30.420.10 | - |
| SUPERFAMILY | SSF101690 | PAZ domain |
| Pfam | PF02171 | Piwi domain |
| Gene3D | G3DSA:3.40.50.2300 | - |
| SUPERFAMILY | SSF53098 | Ribonuclease H-like |
| Pfam | PF08699 | Argonaute linker 1 domain |
| PANTHER | PTHR22891 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2C |
| ProSiteProfiles | PS50821 | PAZ domain profile. |
| CDD | cd04657 | Piwi_ago-like |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| SMART | SM01163 | DUF1785_2 |
| KEGG | K11593 | eukaryotic translation initiation factor 2C |
| KOG | KOG1041 | Translation initiation factor 2C (eIF-2C) and related proteins; [J] |
| MapolyID | Mapoly0045s0024 | - |
| GO | GO:0004521 | RNA endonuclease activity |
| GO | GO:0003723 | RNA binding |
| GO | GO:0005515 | protein binding |
| GO | GO:0035194 | regulatory ncRNA-mediated post-transcriptional gene silencing |
| GO | GO:0005737 | cytoplasm |
| GO | GO:0003676 | nucleic acid binding |
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpAGO4b | miRNA biogenesis protein | Provisional |
Sequences: |
Gene UTR + CDS + intron |
| >Mp6g20400.1 ATGGCAGAAA AGGTGACTAG CTTGAAAACA AAAGCAGAAC CAGTGGACGC AACTACTGAG CAGTCTGCAA AGAGATCTAA GCATGAAAAA ACAGCCGAAC CTGGGGTTCC GAAACAACAG ATTCCAAGGC CCGGCTACGG AAAGATGGGC AGACAAGTCA GAATTGTTGC AAATCACTTC CTGGTGAAAT TCCAGCCTCG CACGGCGGTC ACGCACTACA GCTGCAAGGT GTACGTCACG AGTGACGAGA ACAGACCTTT GAGAAGCACA GTCAAACGTA AGGTTGTCGA TGCTCTCCGC GACAATATCG ATTTCAAAGG CCTCCCTTTC GCGTACGATG GCGACCAAAA TCTGTACGTG GCCGGGCAAC TCGAGATCAG ACTCAAAGAG TATCAAGTAA GCCTGCCGGC GGATCACCGC CGGGCCAGTC CTACATTTAA CGTCGAGCTG GCCTACGCTG CGGTCATAGA TATGGCCACC ATGGCGGCTG TCATTCGTGG GGAGCCAGAC AAGAGAGCTC AGGATGCTCT CAGGGTTCTG GACATCATAA TACGTGAGCA TGCATCGAAG AAGGGCAACA TTCTCCAGCG CGATTGTTTC TTCAGTAAGG CCTTCGGGCG AGTGGTCGAT TTACAAGGGG GCGCAGAGAC GTGGAAGGGC TACCACGCGA GCTTCAAACT GAATCAGAAT GGACTGTCGT TGAATCTGGA CACCGCCACA ACGATTATGA TCAAGGAGAG CAAAGTTGAG GCGTTCGTGG AAGAATTGTG CAGGAAGAAA ACCCGACAAT TCACGGATGA AGATTACGGC AAGTGCAAGA GGGCGCTGAA GGGCATACTG ATCCACAACG AGCATCAGAA GGAACGCAAT CACAAAATCC TCGGGTTCAG TCCAGCGGCA AATAGCTCTC AGACGTTTCG GATGAAGAAG AAAAACTCGC CGGACACGAT CGACGATTTC GAAGAGATCA CGGTGGCCGA CTACTACACC AAGGTGAAGG GCGTCGCCCT GAAGGCGCCC TTCCAGCGAG CCCTGGATGT GGGGCGAAAG GGCAGGCCCA CGTACTTTCC CATGGAGCAC TGCTCGATCG CGCCTGGGCA GAGGTACAGG AGAGCGCTCA CCACAATCCA GAGGCAGGGG ATGATCAGGG AGTGCAAGCA AAACCCGGAC CAGCGCGTGC GGGCCATCGA CGCCATGATG CAGACGAACA AATTCCACGA CGACGAGATG GTCAAGGCCT TCGACGTTCG CATCGACGAC AAGATGGTGC GGCTCGAGGG TCGCGTGCTG GATCCGCCGC AGCTCCAATT CGCCAAGAAC CACCGCGAGA CGCCGCGCAA CGGGAGATGG AACTTCAATG TCGATCGGCA GATGAATCGG CCCGCGAGCA CGAGCAAGTG GATCGTGGTC TGGTTCAAGA GCCGGCGCAC TCTGAGACTG GACACGAAGA AGATCGGCAG CGACCTCGTG GACGTGGCGG CCAAGAAGGG CATGAAGCTC GGGGCCTTCG AGGTCTTCGA GGAGGGCGAC GGCGATCACG AGCGCCGGAG CCCGGCGCAG CGCGTCGACG CCATGATCGA CCGGCTGCGC GACGCCGTTC GCGACGCTCG AGGCGCGCCG GTGCCGGCGG CGCGCTGGCC GCTGATCGTC GCCATCCTCC CTGAGAAGTC GCCCGACCTC TACGTCCCGT TCAAGAAGAT CTGCGAGACG CAGATTGGCG TCGTGACGCA GTGCATCGTG CCGCCCAACG GGCAAGCCAA TGCCAAGTAC CTGTCCAGCG TCTGCCTGAA ACTCAACCTC AAGCTCGGCG GCTACAACTC GGTGCTCGCC GGCGAGGACG GCAAGACGCT CCCGAAGATC TCCCTCGTGC CCACCATCAT CTTCGGCCTC GATGTCTCGC ACGGCCCGCC GGGCGACTGC GACTCGCCGT CCGTCGCCGC CGCGGTGGCC ACCGTCGAGT GGCCGCGGTT CTCGCGGTAC GCCTGCAGCA TCCGCGCCCA GAAGCCCAAG GAGGAGATCG TCGCCGGCCT GTTCCAGAAA ACCGGGGACG GTCGCGACGC CGGCATGGTT CAGGAGCTTC TGATGCAGTT CTTCCTCAAG TCCGCGGCGG CGGGCCGGCC GCTGGAGGAG CGGAAGCCGC GCCAGATTCT GGTGTTCCGC GACGGCGTGA GCGAGTCGCA GTTCCGGGAG GTTCTGGATC AGGAGGTGGG CGCCTTCAAG GCGGCGTGCC GGGCCTTGGA GAAGGACTAC GACCCTCGCA TCACCTTCGT CGTGGTTCAG AAGAAGCACC ACACGCGGTT CTTCCAAGAC GCCCAGTTCG GGAACGTGGC CCCGGGAACC GTCGTCGACC GCGTCGTCTG CCATCCTCGG CACTACGACT TCTACATGGT CAGCCACGCT GCCATCGGAA CGTCTCGCCC TACGCACTAC CACGTTCTGT GCGACGAGAT CGGCTTCAGC GCCGATGACA TCCAGCAACT CACTCACGGC CTGTGCTACA CGTACTCGCG CTGCACGTCC GCGGTCTCCG TCGTCGCTCC CGCATACTAC GCGCATGTGG CCGCAGCTCA CTGTCGGAAC TTCGTCGACA CGTCGGATTC CAGTTCGGAT TCCACTGTCC GAGCCGCGGA GCACGACGAA CGATGTTTGT CGGCCCTTCC GAAGATTCAC GACAACGTTT TACAAAAAAT GTTTTATGCC TAG |
mRNA UTR + CDS |
| >Mp6g20400.1 ATGGCAGAAA AGGTGACTAG CTTGAAAACA AAAGCAGAAC CAGTGGACGC AACTACTGAG CAGTCTGCAA AGAGATCTAA GCATGAAAAA ACAGCCGAAC CTGGGGTTCC GAAACAACAG ATTCCAAGGC CCGGCTACGG AAAGATGGGC AGACAAGTCA GAATTGTTGC AAATCACTTC CTGGTGAAAT TCCAGCCTCG CACGGCGGTC ACGCACTACA GCTGCAAGGT GTACGTCACG AGTGACGAGA ACAGACCTTT GAGAAGCACA GTCAAACGTA AGGTTGTCGA TGCTCTCCGC GACAATATCG ATTTCAAAGG CCTCCCTTTC GCGTACGATG GCGACCAAAA TCTGTACGTG GCCGGGCAAC TCGAGATCAG ACTCAAAGAG TATCAAGTAA GCCTGCCGGC GGATCACCGC CGGGCCAGTC CTACATTTAA CGTCGAGCTG GCCTACGCTG CGGTCATAGA TATGGCCACC ATGGCGGCTG TCATTCGTGG GGAGCCAGAC AAGAGAGCTC AGGATGCTCT CAGGGTTCTG GACATCATAA TACGTGAGCA TGCATCGAAG AAGGGCAACA TTCTCCAGCG CGATTGTTTC TTCAGTAAGG CCTTCGGGCG AGTGGTCGAT TTACAAGGGG GCGCAGAGAC GTGGAAGGGC TACCACGCGA GCTTCAAACT GAATCAGAAT GGACTGTCGT TGAATCTGGA CACCGCCACA ACGATTATGA TCAAGGAGAG CAAAGTTGAG GCGTTCGTGG AAGAATTGTG CAGGAAGAAA ACCCGACAAT TCACGGATGA AGATTACGGC AAGTGCAAGA GGGCGCTGAA GGGCATACTG ATCCACAACG AGCATCAGAA GGAACGCAAT CACAAAATCC TCGGGTTCAG TCCAGCGGCA AATAGCTCTC AGACGTTTCG GATGAAGAAG AAAAACTCGC CGGACACGAT CGACGATTTC GAAGAGATCA CGGTGGCCGA CTACTACACC AAGGTGAAGG GCGTCGCCCT GAAGGCGCCC TTCCAGCGAG CCCTGGATGT GGGGCGAAAG GGCAGGCCCA CGTACTTTCC CATGGAGCAC TGCTCGATCG CGCCTGGGCA GAGGTACAGG AGAGCGCTCA CCACAATCCA GAGGCAGGGG ATGATCAGGG AGTGCAAGCA AAACCCGGAC CAGCGCGTGC GGGCCATCGA CGCCATGATG CAGACGAACA AATTCCACGA CGACGAGATG GTCAAGGCCT TCGACGTTCG CATCGACGAC AAGATGGTGC GGCTCGAGGG TCGCGTGCTG GATCCGCCGC AGCTCCAATT CGCCAAGAAC CACCGCGAGA CGCCGCGCAA CGGGAGATGG AACTTCAATG TCGATCGGCA GATGAATCGG CCCGCGAGCA CGAGCAAGTG GATCGTGGTC TGGTTCAAGA GCCGGCGCAC TCTGAGACTG GACACGAAGA AGATCGGCAG CGACCTCGTG GACGTGGCGG CCAAGAAGGG CATGAAGCTC GGGGCCTTCG AGGTCTTCGA GGAGGGCGAC GGCGATCACG AGCGCCGGAG CCCGGCGCAG CGCGTCGACG CCATGATCGA CCGGCTGCGC GACGCCGTTC GCGACGCTCG AGGCGCGCCG GTGCCGGCGG CGCGCTGGCC GCTGATCGTC GCCATCCTCC CTGAGAAGTC GCCCGACCTC TACGTCCCGT TCAAGAAGAT CTGCGAGACG CAGATTGGCG TCGTGACGCA GTGCATCGTG CCGCCCAACG GGCAAGCCAA TGCCAAGTAC CTGTCCAGCG TCTGCCTGAA ACTCAACCTC AAGCTCGGCG GCTACAACTC GGTGCTCGCC GGCGAGGACG GCAAGACGCT CCCGAAGATC TCCCTCGTGC CCACCATCAT CTTCGGCCTC GATGTCTCGC ACGGCCCGCC GGGCGACTGC GACTCGCCGT CCGTCGCCGC CGCGGTGGCC ACCGTCGAGT GGCCGCGGTT CTCGCGGTAC GCCTGCAGCA TCCGCGCCCA GAAGCCCAAG GAGGAGATCG TCGCCGGCCT GTTCCAGAAA ACCGGGGACG GTCGCGACGC CGGCATGGTT CAGGAGCTTC TGATGCAGTT CTTCCTCAAG TCCGCGGCGG CGGGCCGGCC GCTGGAGGAG CGGAAGCCGC GCCAGATTCT GGTGTTCCGC GACGGCGTGA GCGAGTCGCA GTTCCGGGAG GTTCTGGATC AGGAGGTGGG CGCCTTCAAG GCGGCGTGCC GGGCCTTGGA GAAGGACTAC GACCCTCGCA TCACCTTCGT CGTGGTTCAG AAGAAGCACC ACACGCGGTT CTTCCAAGAC GCCCAGTTCG GGAACGTGGC CCCGGGAACC GTCGTCGACC GCGTCGTCTG CCATCCTCGG CACTACGACT TCTACATGGT CAGCCACGCT GCCATCGGAA CGTCTCGCCC TACGCACTAC CACGTTCTGT GCGACGAGAT CGGCTTCAGC GCCGATGACA TCCAGCAACT CACTCACGGC CTGTGCTACA CGTACTCGCG CTGCACGTCC GCGGTCTCCG TCGTCGCTCC CGCATACTAC GCGCATGTGG CCGCAGCTCA CTGTCGGAAC TTCGTCGACA CGTCGGATTC CAGTTCGGAT TCCACTGTCC GAGCCGCGGA GCACGACGAA CGATGTTTGT CGGCCCTTCC GAAGATTCAC GACAACGTTT TACAAAAAAT GTTTTATGCC TAG |
CDS |
| >Mp6g20400.1 ATGGCAGAAA AGGTGACTAG CTTGAAAACA AAAGCAGAAC CAGTGGACGC AACTACTGAG CAGTCTGCAA AGAGATCTAA GCATGAAAAA ACAGCCGAAC CTGGGGTTCC GAAACAACAG ATTCCAAGGC CCGGCTACGG AAAGATGGGC AGACAAGTCA GAATTGTTGC AAATCACTTC CTGGTGAAAT TCCAGCCTCG CACGGCGGTC ACGCACTACA GCTGCAAGGT GTACGTCACG AGTGACGAGA ACAGACCTTT GAGAAGCACA GTCAAACGTA AGGTTGTCGA TGCTCTCCGC GACAATATCG ATTTCAAAGG CCTCCCTTTC GCGTACGATG GCGACCAAAA TCTGTACGTG GCCGGGCAAC TCGAGATCAG ACTCAAAGAG TATCAAGTAA GCCTGCCGGC GGATCACCGC CGGGCCAGTC CTACATTTAA CGTCGAGCTG GCCTACGCTG CGGTCATAGA TATGGCCACC ATGGCGGCTG TCATTCGTGG GGAGCCAGAC AAGAGAGCTC AGGATGCTCT CAGGGTTCTG GACATCATAA TACGTGAGCA TGCATCGAAG AAGGGCAACA TTCTCCAGCG CGATTGTTTC TTCAGTAAGG CCTTCGGGCG AGTGGTCGAT TTACAAGGGG GCGCAGAGAC GTGGAAGGGC TACCACGCGA GCTTCAAACT GAATCAGAAT GGACTGTCGT TGAATCTGGA CACCGCCACA ACGATTATGA TCAAGGAGAG CAAAGTTGAG GCGTTCGTGG AAGAATTGTG CAGGAAGAAA ACCCGACAAT TCACGGATGA AGATTACGGC AAGTGCAAGA GGGCGCTGAA GGGCATACTG ATCCACAACG AGCATCAGAA GGAACGCAAT CACAAAATCC TCGGGTTCAG TCCAGCGGCA AATAGCTCTC AGACGTTTCG GATGAAGAAG AAAAACTCGC CGGACACGAT CGACGATTTC GAAGAGATCA CGGTGGCCGA CTACTACACC AAGGTGAAGG GCGTCGCCCT GAAGGCGCCC TTCCAGCGAG CCCTGGATGT GGGGCGAAAG GGCAGGCCCA CGTACTTTCC CATGGAGCAC TGCTCGATCG CGCCTGGGCA GAGGTACAGG AGAGCGCTCA CCACAATCCA GAGGCAGGGG ATGATCAGGG AGTGCAAGCA AAACCCGGAC CAGCGCGTGC GGGCCATCGA CGCCATGATG CAGACGAACA AATTCCACGA CGACGAGATG GTCAAGGCCT TCGACGTTCG CATCGACGAC AAGATGGTGC GGCTCGAGGG TCGCGTGCTG GATCCGCCGC AGCTCCAATT CGCCAAGAAC CACCGCGAGA CGCCGCGCAA CGGGAGATGG AACTTCAATG TCGATCGGCA GATGAATCGG CCCGCGAGCA CGAGCAAGTG GATCGTGGTC TGGTTCAAGA GCCGGCGCAC TCTGAGACTG GACACGAAGA AGATCGGCAG CGACCTCGTG GACGTGGCGG CCAAGAAGGG CATGAAGCTC GGGGCCTTCG AGGTCTTCGA GGAGGGCGAC GGCGATCACG AGCGCCGGAG CCCGGCGCAG CGCGTCGACG CCATGATCGA CCGGCTGCGC GACGCCGTTC GCGACGCTCG AGGCGCGCCG GTGCCGGCGG CGCGCTGGCC GCTGATCGTC GCCATCCTCC CTGAGAAGTC GCCCGACCTC TACGTCCCGT TCAAGAAGAT CTGCGAGACG CAGATTGGCG TCGTGACGCA GTGCATCGTG CCGCCCAACG GGCAAGCCAA TGCCAAGTAC CTGTCCAGCG TCTGCCTGAA ACTCAACCTC AAGCTCGGCG GCTACAACTC GGTGCTCGCC GGCGAGGACG GCAAGACGCT CCCGAAGATC TCCCTCGTGC CCACCATCAT CTTCGGCCTC GATGTCTCGC ACGGCCCGCC GGGCGACTGC GACTCGCCGT CCGTCGCCGC CGCGGTGGCC ACCGTCGAGT GGCCGCGGTT CTCGCGGTAC GCCTGCAGCA TCCGCGCCCA GAAGCCCAAG GAGGAGATCG TCGCCGGCCT GTTCCAGAAA ACCGGGGACG GTCGCGACGC CGGCATGGTT CAGGAGCTTC TGATGCAGTT CTTCCTCAAG TCCGCGGCGG CGGGCCGGCC GCTGGAGGAG CGGAAGCCGC GCCAGATTCT GGTGTTCCGC GACGGCGTGA GCGAGTCGCA GTTCCGGGAG GTTCTGGATC AGGAGGTGGG CGCCTTCAAG GCGGCGTGCC GGGCCTTGGA GAAGGACTAC GACCCTCGCA TCACCTTCGT CGTGGTTCAG AAGAAGCACC ACACGCGGTT CTTCCAAGAC GCCCAGTTCG GGAACGTGGC CCCGGGAACC GTCGTCGACC GCGTCGTCTG CCATCCTCGG CACTACGACT TCTACATGGT CAGCCACGCT GCCATCGGAA CGTCTCGCCC TACGCACTAC CACGTTCTGT GCGACGAGAT CGGCTTCAGC GCCGATGACA TCCAGCAACT CACTCACGGC CTGTGCTACA CGTACTCGCG CTGCACGTCC GCGGTCTCCG TCGTCGCTCC CGCATACTAC GCGCATGTGG CCGCAGCTCA CTGTCGGAAC TTCGTCGACA CGTCGGATTC CAGTTCGGAT TCCACTGTCC GAGCCGCGGA GCACGACGAA CGATGTTTGT CGGCCCTTCC GAAGATTCAC GACAACGTTT TACAAAAAAT GTTTTATGCC TAG |
Protein |
| >Mp6g20400.1 MAEKVTSLKT KAEPVDATTE QSAKRSKHEK TAEPGVPKQQ IPRPGYGKMG RQVRIVANHF LVKFQPRTAV THYSCKVYVT SDENRPLRST VKRKVVDALR DNIDFKGLPF AYDGDQNLYV AGQLEIRLKE YQVSLPADHR RASPTFNVEL AYAAVIDMAT MAAVIRGEPD KRAQDALRVL DIIIREHASK KGNILQRDCF FSKAFGRVVD LQGGAETWKG YHASFKLNQN GLSLNLDTAT TIMIKESKVE AFVEELCRKK TRQFTDEDYG KCKRALKGIL IHNEHQKERN HKILGFSPAA NSSQTFRMKK KNSPDTIDDF EEITVADYYT KVKGVALKAP FQRALDVGRK GRPTYFPMEH CSIAPGQRYR RALTTIQRQG MIRECKQNPD QRVRAIDAMM QTNKFHDDEM VKAFDVRIDD KMVRLEGRVL DPPQLQFAKN HRETPRNGRW NFNVDRQMNR PASTSKWIVV WFKSRRTLRL DTKKIGSDLV DVAAKKGMKL GAFEVFEEGD GDHERRSPAQ RVDAMIDRLR DAVRDARGAP VPAARWPLIV AILPEKSPDL YVPFKKICET QIGVVTQCIV PPNGQANAKY LSSVCLKLNL KLGGYNSVLA GEDGKTLPKI SLVPTIIFGL DVSHGPPGDC DSPSVAAAVA TVEWPRFSRY ACSIRAQKPK EEIVAGLFQK TGDGRDAGMV QELLMQFFLK SAAAGRPLEE RKPRQILVFR DGVSESQFRE VLDQEVGAFK AACRALEKDY DPRITFVVVQ KKHHTRFFQD AQFGNVAPGT VVDRVVCHPR HYDFYMVSHA AIGTSRPTHY HVLCDEIGFS ADDIQQLTHG LCYTYSRCTS AVSVVAPAYY AHVAAAHCRN FVDTSDSSSD STVRAAEHDE RCLSALPKIH DNVLQKMFYA |