Mp7g00960



Description

Annotation

Database ID Description
Pfam PF05023 Phytochelatin synthase
SUPERFAMILY SSF54001 Cysteine proteinases
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR33447 GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE
ProSiteProfiles PS51443 Phytochelatin synthase (PCS) domain profile.
FunFam G3DSA:3.90.70.30:FF:000001 Glutathione gamma-glutamylcysteinyltransferase 1
Gene3D G3DSA:3.90.70.30 -
Pfam PF09328 Domain of unknown function (DUF1984)
KEGG K05941 glutathione gamma-glutamylcysteinyltransferase [EC:2.3.2.15]
KEGG K25587 glutathione-S-conjugate glycine hydrolase [EC:3.4.17.25]
KOG KOG0632 Phytochelatin synthase; [P]
MapolyID Mapoly0046s0028 -
GO GO:0046872 metal ion binding
GO GO:0010273 detoxification of copper ion
GO GO:0046938 phytochelatin biosynthetic process
GO GO:0098849 cellular detoxification of cadmium ion
GO GO:0010038 response to metal ion
GO GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity

Nomenclature

Gene symbol Product Transcript ID Status
MpPCS Phytochelatyn Provisional

Associated Literature (AI-based literature mining, Beta-version)

Phytochelatin synthase isolated and cloned from M. polymorpha; recombinant enzyme catalyzed PCn synthesis from GSH, expression overexpression fully complemented the PC-deficient Arabidopsis cad1-3 mutant, and yeast expressing it tolerated 100 uM CdSO4. Acts as the central functionally studied gene, expressed constitutively with stronger thallus-midrib expression.

0 core 1 peripheral

Li, M., et al. (2020e)   research sequence subject
Genome accession (Mapoly0046s0028.1) for the isolated full-length MpPCS coding region.

Transcript models

Transcript ID Location Sequences Extract region
Mp7g00960.1 chr7:1237653..1243954 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp7g00960 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp7g00960 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.