Mp7g05820



Description

Annotation

Database ID Description
PANTHER PTHR39757 -
SUPERFAMILY SSF51905 FAD/NAD(P)-binding domain
Gene3D G3DSA:3.50.50.60 -
NCBIfam TIGR01790 lycopene cyclase family protein
PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature
Pfam PF05834 Lycopene cyclase protein
KEGG K06444 lycopene epsilon-cyclase [EC:5.5.1.18]
KEGG K06443 lycopene beta-cyclase [EC:5.5.1.19]
MapolyID Mapoly0057s0089 -
GO GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO GO:0016117 carotenoid biosynthetic process

Nomenclature

Gene symbol Product Transcript ID Status
MpLCY-like1 Secondary metabolism enzyme Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp7g05820.1 chr7:8319786..8326448 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp7g05820.2 chr7:8319786..8326448 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.