Mp7g16780



Description

Annotation

Database ID Description
SMART SM00249 PHD_3
CDD cd10518 SET_SETD1-like
SUPERFAMILY SSF63748 Tudor/PWWP/MBT
CDD cd15662 ePHD_ATX1_2_like
Gene3D G3DSA:2.170.270.10 SET domain
Pfam PF13831 PHD-finger
SMART SM00293 PWWP_4
MobiDBLite mobidb-lite consensus disorder prediction
CDD cd20404 Tudor_Agenet_AtEML-like
Pfam PF05964 F/Y-rich N-terminus
CDD cd20142 PWWP_AtATX1-like
SMART SM00542 fyrc_3
Gene3D G3DSA:3.30.40.10 Zinc/RING finger domain, C3HC4 (zinc finger)
Gene3D G3DSA:2.30.30.140 -
ProSiteProfiles PS50016 Zinc finger PHD-type profile.
ProSitePatterns PS01359 Zinc finger PHD-type signature.
Pfam PF00856 SET domain
SUPERFAMILY SSF82199 SET domain
Pfam PF13832 PHD-zinc-finger like domain
ProSiteProfiles PS50868 Post-SET domain profile.
Pfam PF05965 F/Y rich C-terminus
ProSiteProfiles PS50280 SET domain profile.
PANTHER PTHR13793 PHD FINGER PROTEINS
SMART SM00541 fyrn_3
ProSiteProfiles PS51542 FYR domain FYRN motif profile.
ProSiteProfiles PS51805 Extended PHD (ePHD) domain profile.
CDD cd15494 PHD_ATX1_2_like
Gene3D G3DSA:3.30.160.360 -
Pfam PF00855 PWWP domain
SUPERFAMILY SSF57903 FYVE/PHD zinc finger
ProSiteProfiles PS51543 FYR domain FYRC motif profile.
SMART SM00317 set_7
ProSiteProfiles PS50812 PWWP domain profile.
KOG KOG1080 Histone H3 (Lys4) methyltransferase complex, subunit SET1 and related methyltransferases; N-term missing; [BK]
KOG KOG1904 Transcription coactivator; C-term missing; [K]
KOG KOG1015 Transcription regulator XNP/ATRX, DEAD-box superfamily; C-term missing; [K]
MapolyID Mapoly0051s0016 -

Nomenclature

Gene symbol Product Transcript ID Status
MpATX1 Chromatin related protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp7g16780.1 chr7:20995625..21012540 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp7g16780.2 chr7:20995625..21012540 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.