Mp8g01420



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR47162 OS02G0192300 PROTEIN
Gene3D G3DSA:1.20.920.10 -
SMART SM00297 bromo_6
Pfam PF15613 Williams-Beuren syndrome DDT (WSD), D-TOX E motif
SUPERFAMILY SSF54171 DNA-binding domain
CDD cd04369 Bromodomain
Gene3D G3DSA:3.30.160.360 -
ProSiteProfiles PS51542 FYR domain FYRN motif profile.
SMART SM00249 PHD_3
ProSiteProfiles PS50016 Zinc finger PHD-type profile.
Gene3D G3DSA:3.30.40.10 Zinc/RING finger domain, C3HC4 (zinc finger)
CDD cd15489 PHD_SF
SUPERFAMILY SSF57903 FYVE/PHD zinc finger
CDD cd15519 PHD1_Lid2p_like
Gene3D G3DSA:3.30.890.10 -
ProSitePatterns PS01359 Zinc finger PHD-type signature.
Pfam PF00628 PHD-finger
Pfam PF15612 WSTF, HB1, Itc1p, MBD9 motif 1
ProSiteProfiles PS50982 Methyl-CpG-binding domain (MBD) profile.
Pfam PF02791 DDT domain
SUPERFAMILY SSF47370 Bromodomain
Pfam PF05964 F/Y-rich N-terminus
ProSiteProfiles PS51543 FYR domain FYRC motif profile.
KOG KOG1244 Predicted transcription factor Requiem/NEURO-D4; N-term missing; [K]
KOG KOG4299 PHD Zn-finger protein; N-term missing; C-term missing; [R]
MapolyID Mapoly0064s0056 -
GO GO:0005634 nucleus
GO GO:0005515 protein binding
GO GO:0003677 DNA binding

Nomenclature

Gene symbol Product Transcript ID Status
MpBromo12 Chromatin related protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp8g01420.1 chr8:1547153..1562282 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.