Mp8g05510



Description

Annotation

Database ID Description
CDD cd05171 PIKKc_ATM
FunFam G3DSA:1.10.1070.11:FF:000015 Serine/threonine-protein kinase ATM
FunFam G3DSA:3.30.1010.10:FF:000023 Serine/threonine-protein kinase ATM
Gene3D G3DSA:1.10.1070.11 -
Gene3D G3DSA:3.30.1010.10 -
KEGG K04728 serine-protein kinase ATM [EC:2.7.11.1]
KOG KOG0892 Protein kinase ATM/Tel1, involved in telomere length regulation and DNA repair; C-term missing; [TBLD]
KOG KOG0892 Protein kinase ATM/Tel1, involved in telomere length regulation and DNA repair; N-term missing; [TBLD]
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR37079 SERINE/THREONINE-PROTEIN KINASE ATM
Pfam PF00454 Phosphatidylinositol 3- and 4-kinase
Pfam PF02259 FAT domain
Pfam PF02260 FATC domain
Pfam PF11640 Telomere-length maintenance and DNA damage repair
ProSitePatterns PS00915 Phosphatidylinositol 3- and 4-kinases signature 1.
ProSitePatterns PS00916 Phosphatidylinositol 3- and 4-kinases signature 2.
ProSiteProfiles PS50290 Phosphatidylinositol 3- and 4-kinases catalytic domain profile.
ProSiteProfiles PS51189 FAT domain profile.
ProSiteProfiles PS51190 FATC domain profile.
SMART SM00146 pi3k_hr1_6
SMART SM01343 FATC_2
SUPERFAMILY SSF48371 ARM repeat
SUPERFAMILY SSF56112 Protein kinase-like (PK-like)
GO GO:0005515 protein binding
GO GO:0006974 DNA damage response
GO GO:0004674 protein serine/threonine kinase activity
GO GO:0006281 DNA repair
GO GO:0016301 kinase activity
MapolyID Mapoly0081s0051 -

Nomenclature

Gene symbol Product Transcript ID Status
MpATM ATAXIA-TELANGIECTASIA MUTATED (ATM) DNA-damage checkpoint kinase Published
Locus assigned by MarpolBase literature-mining curation (2026-10): Stated in the paper: "nominated MpATM (Mp8g05510)"; the locus is annotated KEGG K04728 (ATM).

Associated Literature (AI-based literature mining)

ATAXIA-TELANGIECTASIA MUTATED (ATM) DNA-damage checkpoint kinase; (ATAXIA-TELANGIECTASIA MUTATED) acts redundantly with MpATR in the double-strand break response; the Mpatm/atr double mutant shows aggravated clonal growth defects. (from nomenclature)

1 core 0 peripheral

Li QQ, Li H, De Moor J, Sbrocca I, Xiang Y, Yang SL, Jiang ZY, He L, Wang JY, Herbst J, van de Cotte B, De Smet I, Cimini S, De Veylder L. (2026) · The Plant cell  research experimental subject
MpATM (ATAXIA-TELANGIECTASIA MUTATED) acts redundantly with MpATR in the double-strand break response; the Mpatm/atr double mutant shows aggravated clonal growth defects.

Transcript models

Transcript ID Location Sequences Extract region
Mp8g05510.1 chr8:7615505..7649139 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp8g05510 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp8g05510 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

MarpolBase / Genome Informatics Lab. NIG.