Mp8g08190



Description

Annotation

Database ID Description
NCBIfam TIGR01565 homeobox domain, ZF-HD class
Gene3D G3DSA:1.10.10.60 -
FunFam G3DSA:1.10.10.60:FF:000257 Zinc-finger homeodomain protein 2
NCBIfam TIGR01566 ZF-HD homeobox protein Cys/His-rich dimerization domain
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR31948 ZINC-FINGER HOMEODOMAIN PROTEIN 2
ProSiteProfiles PS51523 Zinc-finger ZF-HD dimerization-type profile.
Pfam PF04770 ZF-HD protein dimerisation region
SUPERFAMILY SSF46689 Homeodomain-like
MapolyID Mapoly0063s0098 -
GO GO:0005634 nucleus
GO GO:0003700 DNA-binding transcription factor activity
GO GO:0050793 regulation of developmental process
GO GO:0006355 regulation of DNA-templated transcription
GO GO:0000976 transcription cis-regulatory region binding

Nomenclature

Gene symbol Product Transcript ID Status
MpHD13 transcription factor, HD, homeodomain protein Published
MpPLINC transcription factor, HD, Zinc finger class homeodomain Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp8g08190.1 chr8:10941300..10945108 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp8g08190.2 chr8:10941300..10945108 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.