Mp8g08450



Description

Annotation

Database ID Description
PANTHER PTHR10799 SNF2/RAD54 HELICASE FAMILY
ProSiteProfiles PS51194 Superfamilies 1 and 2 helicase C-terminal domain profile.
MobiDBLite mobidb-lite consensus disorder prediction
ProSiteProfiles PS51192 Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.
Gene3D G3DSA:3.40.50.300 -
Pfam PF00176 SNF2-related domain
CDD cd17919 DEXHc_Snf
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
Gene3D G3DSA:3.40.50.10810 -
FunFam G3DSA:3.40.50.10810:FF:000038 Protein CHROMATIN REMODELING 19 isoform A
SMART SM00490 helicmild6
SMART SM00487 ultradead3
CDD cd18793 SF2_C_SNF
Pfam PF00271 Helicase conserved C-terminal domain
KEGG K14439 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
KOG KOG0389 SNF2 family DNA-dependent ATPase; N-term missing; [B]
MapolyID Mapoly0063s0073 -

Nomenclature

Gene symbol Product Transcript ID Status
Mpsnf1.23 Chromatin related protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp8g08450.1 chr8:11345839..11349703 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.