Mp8g14000



Description

Annotation

Database ID Description
Pfam PF13249 Squalene-hopene cyclase N-terminal domain
Gene3D G3DSA:1.50.10.20 -
Pfam PF13243 Squalene-hopene cyclase C-terminal domain
SFLD SFLDG01016 Prenyltransferase Like 2
SUPERFAMILY SSF48239 Terpenoid cyclases/Protein prenyltransferases
NCBIfam TIGR01787 squalene/oxidosqualene cyclases
NCBIfam TIGR01507 squalene--hopene cyclase
PANTHER PTHR11764 TERPENE CYCLASE/MUTASE FAMILY MEMBER
KEGG K06045 squalene-hopene/tetraprenyl-beta-curcumene cyclase [EC:5.4.99.17 4.2.1.129]
KOG KOG0497 Oxidosqualene-lanosterol cyclase and related proteins; [I]
MapolyID Mapoly0108s0025 -
GO GO:0005811 lipid droplet
GO GO:0016104 triterpenoid biosynthetic process
GO GO:0016866 intramolecular transferase activity

Nomenclature

Gene symbol Product Transcript ID Status
MpSQC1 Secondary metabolism enzyme, Terpene biosynthesis enzymes Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp8g14000.1 chr8:17987926..17991154 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp8g14000.2 chr8:17987926..17991154 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.