Mp8g14000



Description

Annotation

Database ID Description
Pfam PF13249 Squalene-hopene cyclase N-terminal domain
Gene3D G3DSA:1.50.10.20 -
Pfam PF13243 Squalene-hopene cyclase C-terminal domain
SFLD SFLDG01016 Prenyltransferase Like 2
SUPERFAMILY SSF48239 Terpenoid cyclases/Protein prenyltransferases
NCBIfam TIGR01787 squalene/oxidosqualene cyclases
NCBIfam TIGR01507 squalene--hopene cyclase
PANTHER PTHR11764 TERPENE CYCLASE/MUTASE FAMILY MEMBER
KEGG K06045 squalene-hopene/tetraprenyl-beta-curcumene cyclase [EC:5.4.99.17 4.2.1.129]
KOG KOG0497 Oxidosqualene-lanosterol cyclase and related proteins; [I]
MapolyID Mapoly0108s0025 -

Nomenclature

Gene symbol Product Transcript ID Status
MpSQC1 Secondary metabolism enzyme, Terpene biosynthesis enzymes Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp8g14000.1 chr8:17987926..17991154 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp8g14000.2 chr8:17987926..17991154 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.