Mp8g17660



Description

Annotation

Database ID Description
PANTHER PTHR10799 SNF2/RAD54 HELICASE FAMILY
MobiDBLite mobidb-lite consensus disorder prediction
CDD cd18793 SF2_C_SNF
ProSiteProfiles PS51194 Superfamilies 1 and 2 helicase C-terminal domain profile.
FunFam G3DSA:3.40.50.300:FF:000755 Probable ATP-dependent DNA helicase CHR12
Gene3D G3DSA:3.40.50.300 -
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
ProSiteProfiles PS51192 Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.
SMART SM00490 helicmild6
Pfam PF00271 Helicase conserved C-terminal domain
SMART SM01314 SnAC_2
Pfam PF14619 Snf2-ATP coupling, chromatin remodelling complex
SMART SM00487 ultradead3
FunFam G3DSA:3.40.50.10810:FF:000016 Chromatin structure-remodeling complex protein SYD
Gene3D G3DSA:3.40.50.10810 -
Pfam PF00176 SNF2-related domain
KOG KOG0386 Chromatin remodeling complex SWI/SNF, component SWI2 and related ATPases (DNA/RNA helicase superfamily); [BK]
MapolyID Mapoly0030s0101 -
GO GO:0005634 nucleus
GO GO:0008094 ATP-dependent activity, acting on DNA
GO GO:0005524 ATP binding
GO GO:0140658 ATP-dependent chromatin remodeler activity
GO GO:0003677 DNA binding
GO GO:0042393 histone binding
GO GO:0045944 positive regulation of transcription by RNA polymerase II

Nomenclature

Gene symbol Product Transcript ID Status
Mpsnf1.24 Chromatin related protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp8g17660.1 chr8:22527072..22538005 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.