Mp8g18560



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
SMART SM00570 shorttest3
Pfam PF17907 AWS domain
Gene3D G3DSA:2.170.270.10 SET domain
Gene3D G3DSA:3.30.40.100 -
SMART SM00317 set_7
ProSiteProfiles PS51215 AWS domain profile.
ProSiteProfiles PS50868 Post-SET domain profile.
Pfam PF00856 SET domain
FunFam G3DSA:2.170.270.10:FF:000035 Histone-lysine N-methyltransferase
CDD cd19172 SET_SETD2
PANTHER PTHR22884 SET DOMAIN PROTEINS
SUPERFAMILY SSF82199 SET domain
Pfam PF07496 CW-type Zinc Finger
ProSiteProfiles PS51050 Zinc finger CW-type profile.
ProSiteProfiles PS50280 SET domain profile.
KOG KOG4442 Clathrin coat binding protein/Huntingtin interacting protein HIP1, involved in regulation of endocytosis; C-term missing; [U]
KOG KOG1984 Vesicle coat complex COPII, subunit SFB3; C-term missing; [U]
KOG KOG1467 Translation initiation factor 2B, delta subunit (eIF-2Bdelta/GCD2); C-term missing; [J]
MapolyID Mapoly0192s0005 -
GO GO:0010452 obsolete histone H3-K36 methylation
GO GO:0005634 nucleus
GO GO:0005515 protein binding
GO GO:0008270 zinc ion binding
GO GO:0042054 histone methyltransferase activity
GO GO:0000785 chromatin
GO GO:0006355 regulation of DNA-templated transcription
GO GO:0046975 histone H3K36 methyltransferase activity

Nomenclature

Gene symbol Product Transcript ID Status
MpASHH3 Chromatin related protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp8g18560.1 chr8:23801842..23819541 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp8g18560.2 chr8:23801836..23819541 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.