MpUg00230



Description

Annotation

Database ID Description
SUPERFAMILY SSF46689 Homeodomain-like
CDD cd00167 SANT
Gene3D G3DSA:1.10.10.60 -
ProSiteProfiles PS50090 Myb-like domain profile.
FunFam G3DSA:1.10.10.60:FF:000010 Transcriptional activator Myb isoform A
ProSiteProfiles PS51294 Myb-type HTH DNA-binding domain profile.
SMART SM00717 sant
FunFam G3DSA:1.10.10.60:FF:000016 Transcriptional activator Myb isoform A
Pfam PF13921 Myb-like DNA-binding domain
Pfam PF00249 Myb-like DNA-binding domain
PANTHER PTHR45614 MYB PROTEIN-RELATED
KOG KOG0048 Transcription factor, Myb superfamily; C-term missing; [K]
KOG KOG1279 Chromatin remodeling factor subunit and related transcription factors; N-term missing; C-term missing; [B]
MapolyID Mapoly0210s0005 -
GO GO:0006355 regulation of DNA-templated transcription
GO GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO GO:0005634 nucleus
GO GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific

Nomenclature

Gene symbol Product Transcript ID Status
Mp3R-MYB7 transcription factor, MYB Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
MpUg00230.1 chrU:2371277..2374109 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.