syntaxin of plants SYP5
Database | ID | Description |
---|---|---|
KOG | KOG3202 | SNARE protein TLG1/Syntaxin 6 |
GO | GO:0005515 | protein binding |
PANTHER | PTHR12380 | SYNTAXIN |
KEGGORTH | K08503 | syntaxin of plants SYP5 |
PFAM | PF05739 | SNARE domain |
Gene symbol | Product | Transcript ID | Status |
---|---|---|---|
MpSYP5 | Ortholog of Arabidopsis SYP5 genes | Published |
Sequences: |
Gene UTR + CDS + intron |
>Mapoly0004s0228.1 CCTCTCTCTC TCGGGGGCGT GCGCTCCTCT CTCCGCGGCG GAGACGAACG CATCGATCGC ATATTCGGGA GCGGGGGGGA GAGCTCCAGC AAGAAGCGCT TCTTGTTGCA GCGGGAGGCC GGTCTCCCTC TCTTTTGCCG TTGAAACGAG ATCAGCTTTG TCGCGCTCTC TCTCCGGTGG CAGGTTTCCA GGTTGGCAGG CAGAGGGTTA GAAGAGGAGA GCACGCGAAC AGGACCGAGG GGTAGACTGC GAGGGGAGAG GCCCGAAGGA AGGAAGGAAG GCAGGCAGGC AGGCACGGGG GAGGACGGGG AGGGCACTGG AGTGGAGTTG AGTGGCAGTG GCAGTGGGAG TGGGAGGGCG GACTGCAGAG CCGAGTGTGC TTCGGAAGCG AGGTTTTCTC GTGTCGTGAG ATCTGGAGAT CCAGATTAGG GGTAGACGGT TTGGTCGTGG GGGTGTTGAT TGACTGATTG ATCGATTGAT TGATCGGGTG ATTCTTGATT GGCGCGGGCG AGGTTTTGGG CTCGGAGGCG CTCGCGGATG CGGGAATGAG AAGAGTGGGA AAGGGCGACG GTGTGGAGTT TGTTGCGACG AGTTGGATGG ATTGCTGATG GTGGCGACGC GACAGGGATA GTTTGGTGGC GGTAGATCAG GTCAGGGTGT AGAAGGAGGT TTGAAGAGCG AGAGTGGTGA GTGACACAGT GGCGGATATC GAAATGGCGC AAGCGGCGTC GGACTCATGG CTGAAGGAGT TCGAGGAGGC CATGCGGCTC GCGGACGATA TCTTGGCCCG AATTAATGAG AGAAATATGA TGCTGGCGTC CGGCAATGAT CCGACACGCC TCGTCTCAGC GACACGCAGG AAAATTACCA TGCTTGGCAC GAAGCTTGAT CGGCTGGAAT CTCTTCTGCA AAATCCTCCC ATCAAACCGA GCATGTAAGC CCCGATCTCA CCATTGAAAT TCGTTTTTCG TTCTGCGATG GCCGTCGTGA AGATCTTCTA GCCTGCAGGG CTTTCAGGAT CGTGACACTG GTGGAGCTTT TCGGAAGTGG GAAACAGACC TATGTTTTGA CATTCTCGAT GGCATCAAAA TCGCAGCAAC ATTCACGAAG ACTTCTTGTT GGTCTCTGTC TTTTTGAAGA ATCTCACATG ACCTTACTCT CGTTTTATTG TCCGACGAGA AATATTTGCG AGAGTTTTAC TGATGGAGGG ATCTCATATT AGCTCTCACG GATTTGTATT TTGTTTTATA TCTACGGTGA GCGTGTTTCG TTAGCATTTG CAGTTGCCTT AAGCATGCTT AAGCTGCCGC AAACCTTGCA TGCGTTATCT TGTCTTGTTT CCAACTTGCC ACGAGGGGTC CTGCCGTACA TCTCAATTTC AGTATCTTTC CGAATTCCAA CGACTGTCTT AGCCTCTTTC TTGTTTTACA CATCTATAGT GAGTGGGAAA GGATGCATTG TCAATCTGGT GCTAACGATC ATCTGGATTT GGAGTTGCCA TATTTTGTTG TCTAGAAAAT GTGTTTCTCT TTTTCTCATC TACATGATCC GTAATGTTGT GCTGTAGAAG CGAGAAGGAG ATGTATCGCC GCCAGGACAT GCTACTGGGT ATACGCTTCA GGACCAAGCA AATGGCAGCA GCTTTGAGCA CTTCTCAGCC TTCCAATAGG TATTCTACGC ATGTTTTGGG TAGTGACAGG GGTTTGGGAG GATCTCTACT GCTGCTTGTT CTAAATGACT GTTGAAAATT GGTTCTAATA TGTGTTCTTG GTGTGCGTTA CTCATTTTCC GGAACCTCGG CTCTTATCAT TTGACGTAAA TTTCTCATAT CGAAACTTGA GCTACATCTA GACTTTGCTC ATAGTGCTTC GCTCGATATC CCGGTCAAGA TCTCCATTTT GATGGACTGT ATGTTAGCTA CACGGTAGCT CGACCGTGGT GGAGATTTTT TTTTTCTTCG GGATGTTTGT TATAAATGTA GTCGTTGGAG AGAGATATGC TTGCCGAACC ACTATCTATC AGTTTTCAGG CAGGCTGTAA ATCACTTGAG GAAAACTTAC TTATATGCCC TCTGACTGAC ATCCTTAAAT TTCTCAGAGC AACTCTTATG GGAACTGATT CCCGATCAGC ACCACCGGAG GAGACTAGTA GGACTACAGG TCTCGATAAC TACGGGATTA TCAACATGCA GAAGCAAGTA ATGAAAGGTG TGGTTTCTTC GTTGTGATTT GACCTAATGG ATTTGTGGAC CTTCTCGTCG CAGTTACGCA TATGAAGAAG TTGTGGTATG AGGGTGAACT ACTGCTCTTC ATAGTAGAAA AAGGAAGGAG TTGCGGTCAA CTCCTGAGTG ATTTTCCTCC CAAGTTTGCA ACGCTGTTTC TTTTGCTTCT TTTGGGGTGG AATAGGGTTA TTTTAAAGAA CTTAAAGTGT ATGTAGGAAA ACAGATTATT GTAAGTGGTT AGGCGGAGAA GAAACCAAAT ACAAATGTTC TCATTTCTTG CACCTTGTGT AACTAATTTC TGACGATGGA TAGGTCTTTG TACAGATTTC TAGCTTTAGA AATTGCGGCA AGAATCTCCA ATTTTTTGTC ACTAAGTTGT CTCTTCTCTT TTGCACGTTC AGCACAAGAC GACGATCTGG CTGGTCTGGA AGCAACTGTC ACCAGCACAA AGCACATTGC TTTGGCAGTC CACGAGGAGC TGGACTTGCA AAATCACCTA CTGGTAAAGT ACCTTTTTTG CATAAGCATC AGATTGACAA AGGCTGAAAC TGTCATTTAG TTGTTTTGGT GAGGGTGTTT AAGCTCCTTG CCCTGAGCTG GAAGGCTTTC ACTCTCATTT TTGTGGCAAA TTTGACGCGG TTTTTACTGA GTTCTCCACT GACATGCTAC TGGGACAATG TTTTGCTTCA TTCAGAATGA TTTGGACAAG GATGCAGACG ACACCAACAA CCGACTCAAG GTACAATATT TGTAATTAGA AACTGTACAT CTAGTGCTGC TCAACAAGTC TAGCGATTAC TGACTTGAGC TTTACATACG CGATTGCACG ATAGAGGTTG ACTGGAAAAA AATTTCACAA AGGCTGTAGT TTTAGTTACT TGGTTTGATC TCGTAGTGTC GCTGACGCGT CTCTCAAAGA TTTTCGCTGG ACGTTCTCGT TTAACTTCTG GGTTGCTTGC AGGCTGCACA GCGCAAAATT GGGATTCTCA ACAAGAATTC GAACAGGGGC TGCTCTGTTA TGTGCATGTG CTTGATGCTC TTAGCAATTG TGCTACTGGT CTTGATTGTC TTAAGCTTGG TCAAATCCTT GTAAGTTTCG ATTCTACGGG TGAAGGTTTC GTATTTGTGT GTTAAATGAT TGGATATATC CCATCAAAGA CAAGGTTGAA GACCAGCAGG TTCCAATCTT GATAGGTTGT ACTTCTAGTG GTCATTGTAC ATACGCCAAA ACAAATATAA ATTGTGTCTA AGAGCCCTTA TTGATAGAAA TTCATTCAAA GCATTTTGTG AAAAGAATTA TTCTGGTAAG AATAGAGGAG TTGATCATAG CAAGGAAGGG TATATATCTC TGTTTCTGTT TCCCCCCCTT TTTTTTGAGT GTAGTCTCAA GCTCACTCAC TTCTCGAGTA CGATCAGACC CCTCTTATCA GTAACTTTCT ATTTTTGTAG ATGAATAAAG TTGTCCCCGA GTTTGATGTC ATGGTTTTTG AGAAATAAAC ATCCTGTCAC ATCCTTTTTT CACTCCG |
mRNA UTR + CDS |
>Mapoly0004s0228.1 CCTCTCTCTC TCGGGGGCGT GCGCTCCTCT CTCCGCGGCG GAGACGAACG CATCGATCGC ATATTCGGGA GCGGGGGGGA GAGCTCCAGC AAGAAGCGCT TCTTGTTGCA GCGGGAGGCC GGTCTCCCTC TCTTTTGCCG TTGAAACGAG ATCAGCTTTG TCGCGCTCTC TCTCCGGTGG CAGGTTTCCA GGTTGGCAGG CAGAGGGTTA GAAGAGGAGA GCACGCGAAC AGGACCGAGG GGTAGACTGC GAGGGGAGAG GCCCGAAGGA AGGAAGGAAG GCAGGCAGGC AGGCACGGGG GAGGACGGGG AGGGCACTGG AGTGGAGTTG AGTGGCAGTG GCAGTGGGAG TGGGAGGGCG GACTGCAGAG CCGAGTGTGC TTCGGAAGCG AGGTTTTCTC GTGTCGTGAG ATCTGGAGAT CCAGATTAGG GGTAGACGGT TTGGTCGTGG GGGTGTTGAT TGACTGATTG ATCGATTGAT TGATCGGGTG ATTCTTGATT GGCGCGGGCG AGGTTTTGGG CTCGGAGGCG CTCGCGGATG CGGGAATGAG AAGAGTGGGA AAGGGCGACG GTGTGGAGTT TGTTGCGACG AGTTGGATGG ATTGCTGATG GTGGCGACGC GACAGGGATA GTTTGGTGGC GGTAGATCAG GTCAGGGTGT AGAAGGAGGT TTGAAGAGCG AGAGTGGTGA GTGACACAGT GGCGGATATC GAAATGGCGC AAGCGGCGTC GGACTCATGG CTGAAGGAGT TCGAGGAGGC CATGCGGCTC GCGGACGATA TCTTGGCCCG AATTAATGAG AGAAATATGA TGCTGGCGTC CGGCAATGAT CCGACACGCC TCGTCTCAGC GACACGCAGG AAAATTACCA TGCTTGGCAC GAAGCTTGAT CGGCTGGAAT CTCTTCTGCA AAATCCTCCC ATCAAACCGA GCATAAGCGA GAAGGAGATG TATCGCCGCC AGGACATGCT ACTGGGTATA CGCTTCAGGA CCAAGCAAAT GGCAGCAGCT TTGAGCACTT CTCAGCCTTC CAATAGAGCA ACTCTTATGG GAACTGATTC CCGATCAGCA CCACCGGAGG AGACTAGTAG GACTACAGGT CTCGATAACT ACGGGATTAT CAACATGCAG AAGCAAGTAA TGAAAGCACA AGACGACGAT CTGGCTGGTC TGGAAGCAAC TGTCACCAGC ACAAAGCACA TTGCTTTGGC AGTCCACGAG GAGCTGGACT TGCAAAATCA CCTACTGAAT GATTTGGACA AGGATGCAGA CGACACCAAC AACCGACTCA AGGCTGCACA GCGCAAAATT GGGATTCTCA ACAAGAATTC GAACAGGGGC TGCTCTGTTA TGTGCATGTG CTTGATGCTC TTAGCAATTG TGCTACTGGT CTTGATTGTC TTAAGCTTGG TCAAATCCTT GTAAGTTTCG ATTCTACGGG TGAAGGTTTC GTATTTGTGT GTTAAATGAT TGGATATATC CCATCAAAGA CAAGGTTGAA GACCAGCAGG TTCCAATCTT GATAGGTTGT ACTTCTAGTG GTCATTGTAC ATACGCCAAA ACAAATATAA ATTGTGTCTA AGAGCCCTTA TTGATAGAAA TTCATTCAAA GCATTTTGTG AAAAGAATTA TTCTGGTAAG AATAGAGGAG TTGATCATAG CAAGGAAGGG TATATATCTC TGTTTCTGTT TCCCCCCCTT TTTTTTGAGT GTAGTCTCAA GCTCACTCAC TTCTCGAGTA CGATCAGACC CCTCTTATCA GTAACTTTCT ATTTTTGTAG ATGAATAAAG TTGTCCCCGA GTTTGATGTC ATGGTTTTTG AGAAATAAAC ATCCTGTCAC ATCCTTTTTT CACTCCG |
CDS |
>Mapoly0004s0228.1 ATGGCGCAAG CGGCGTCGGA CTCATGGCTG AAGGAGTTCG AGGAGGCCAT GCGGCTCGCG GACGATATCT TGGCCCGAAT TAATGAGAGA AATATGATGC TGGCGTCCGG CAATGATCCG ACACGCCTCG TCTCAGCGAC ACGCAGGAAA ATTACCATGC TTGGCACGAA GCTTGATCGG CTGGAATCTC TTCTGCAAAA TCCTCCCATC AAACCGAGCA TAAGCGAGAA GGAGATGTAT CGCCGCCAGG ACATGCTACT GGGTATACGC TTCAGGACCA AGCAAATGGC AGCAGCTTTG AGCACTTCTC AGCCTTCCAA TAGAGCAACT CTTATGGGAA CTGATTCCCG ATCAGCACCA CCGGAGGAGA CTAGTAGGAC TACAGGTCTC GATAACTACG GGATTATCAA CATGCAGAAG CAAGTAATGA AAGCACAAGA CGACGATCTG GCTGGTCTGG AAGCAACTGT CACCAGCACA AAGCACATTG CTTTGGCAGT CCACGAGGAG CTGGACTTGC AAAATCACCT ACTGAATGAT TTGGACAAGG ATGCAGACGA CACCAACAAC CGACTCAAGG CTGCACAGCG CAAAATTGGG ATTCTCAACA AGAATTCGAA CAGGGGCTGC TCTGTTATGT GCATGTGCTT GATGCTCTTA GCAATTGTGC TACTGGTCTT GATTGTCTTA AGCTTGGTCA AATCCTTGTA A |
Protein |
>Mapoly0004s0228.1 MAQAASDSWL KEFEEAMRLA DDILARINER NMMLASGNDP TRLVSATRRK ITMLGTKLDR LESLLQNPPI KPSISEKEMY RRQDMLLGIR FRTKQMAAAL STSQPSNRAT LMGTDSRSAP PEETSRTTGL DNYGIINMQK QVMKAQDDDL AGLEATVTST KHIALAVHEE LDLQNHLLND LDKDADDTNN RLKAAQRKIG ILNKNSNRGC SVMCMCLMLL AIVLLVLIVL SLVKSL |