Mapoly0005s0159



Description

HB1, ASXL, restriction endonuclease HTH domain

Annotation

Database ID Description
GO GO:0003677 DNA binding
KOG KOG0484 Transcription factor PHOX2/ARIX, contains HOX domain
GO GO:0006355 regulation of transcription, DNA-dependent
PANTHER PTHR24326:SF155
PFAM PF00046 Homeobox domain
PFAM PF05066 HB1, ASXL, restriction endonuclease HTH domain
PANTHER PTHR24326 FAMILY NOT NAMED
PFAM PF02791 DDT domain
GO GO:0006351 transcription, DNA-dependent
PFAM PF15612 WSTF, HB1, Itc1p, MBD9 motif 1

Nomenclature

Gene symbol Product Transcript ID Status
MpDDT1 transcription factor, HD, homeodomain protein Published
MpHD1 transcription factor, HD, homeodomain protein Published

Transcript models

Transcript ID Location Sequences Extract region
Mapoly0005s0159.1 scaffold_5:1778246..1792027 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.