SYNTAXIN
Database | ID | Description |
---|---|---|
GO | GO:0016020 | membrane |
GO | GO:0005515 | protein binding |
PANTHER | PTHR19957 | SYNTAXIN |
PFAM | PF00804 | Syntaxin |
KOG | KOG0810 | SNARE protein Syntaxin 1 and related proteins |
PANTHER | PTHR19957:SF80 | |
PFAM | PF05739 | SNARE domain |
Gene symbol | Product | Transcript ID | Status |
---|---|---|---|
MpSYP13A | Ortholog of Arabidopsis SYP13 genes | Published |
Sequences: |
Gene UTR + CDS + intron |
>Mapoly0009s0005.1 GACAGGGAGG GTGGTGGCAA GCGAGGGAGC GAGCGAGCGA GGAGACGGAG GGAGGGGGCA GGAGGAGAGT GTGCAGGAAA GGGAGCTGCG TATGAAAGAG AATGGTAGTT ATAGATTTTT GTTGTTGCTC TCTGTGTTTT CGGGGCGCCG ATTTGATCGG CAGGCAGCCG GGTGGGTGTC GTGGCCAGTT GCTGACTGAC TGCATCACGC CGGGGAGTGG GATTGTTGCT GTTGCGGAGT AGGAGGCCGA ATGAAGCAGG AAAAAGCGGG AGCAGCAGGA CAGGGACCAG TGCGGCAGCA ACATTGGGTT GGGAGCGAAT TCTTCCTAGA GTTGGTTGTG TGGTGAGCAC ACTAGAAAAT TTCCGGTCAC AGCAGATTAC GGAGGAGCGG CAAGAATCAG GATTGTGACT AGGCTGCTGT TGTTGCTATT CGCCGGGTCG TCTTCTTTTG TCGTGCGCGC GGAAGCAGAC GGGGCGTGGT GCTGCTGCAA TTCGCATTCG GCAGGCACGG ATTGGAATTC CCCGGCAAGA TCATTCATAT TGAGGCGTTT TGTAGCGTTT TAGCTTGGCG GCGTCATTGC ACCTGGATTA GTGCAGGCGA GGTTATCGAA CTTTGACGCC GCTGGTTTTT TTCGCTGATA GGTGGTTCGG ATCCTGCGAG TTCCACTTCT TTCCAGCTTT GATCGTCGTA GTCTTTTTTC TACGCAGGGT TTAGTTTATT GGTCTCGACG AACAGGATAG AAATTGCGTA ATTGAATCCA GGTTCAGCAG TAAGCCAAGC AGGCGGCAAT CATGAACGAT CTTTTAGGGG TATGTGCTCC TCTCGAGTCG TCCTTATGAA TTCTGATTCT AATCATTAGC ATTGAGAGCT CAGTCGCACC GAAGGATTCA GGCGATATTC AACGAAAGCC AGCTTACGAG TGGTTCCCTC GTCAGCTTTA GGGTATTGAA GTCTGGTCTG AAAGTGACGG GAGAAGAGCG GGATATGAAG TAATCGTTAG ATTAAATTCT CACAGGACAG GCAGGGATAA TGTACAAGCT GGAAGCCAGA CCTCCTTTCA AACTCTATTT GAGCTTTAAC TTGAGACTAG GCCGATGTCT TGTGCTGTCC CGGATGCGTA TCTACAGGAA GGAGAATGAT TTTGATTTAA ATTGTGCATG CAGGAGTCCG GTCGCCACTC GACTTCAGCT CAAGACGTTA CCGGGAACGG TAGAGAGAAA AATGGCAAGG ATAATAATGA TCTTGAGGCA GGACCATCTG GAACGCCGGA TGGTGGAGCA GACATGCTTC AGTTTTTCAA CGAGGTGCGT CCAAACGCCT GCCCCATGTC GGTAGTTGTG TGGGAAGCCT CGCTTTTGTC GCTGATCGCA GTAATGAGGA GGAACAAGAG CGATCCGCTG TTCTCTAGTA TTGTCTTTTA GAACCTAGTC CTCGAGTATA ACGTTGTGAT CTGTTCTTCT GCCGACAATC TCTTCACGAA GGTCATGTCA GTCTCCCGAA TAGCGTGTGC TTTCTAATTT GTAGTTTCTT TCTTCTCACC ACAGCGTTTT TTGCGTTTGA CAGGTCGGTG TCATTAAGAC TGACATGGCA CAGATTCGAA AAAACTTGGC CAAGCTTCAG GTTGGTTATT CTTTAAGAAC CATACACGTG GCTTTTCCGG ACTTTAATGT CGCAGTTCTA GTTTTCCTGG GATGTGCTTT GACGGTGATT ATTTTTTTTT TTTTAATTCA GAACGAATCA CATGACATTT TCTCTCGTGA ATATGCATCA TGTCAAGACT TGTCTGGCAT GATGCGTATG GGCTCACAAA TTGTGTGGTA TTGGTATGTA GGATGCTCAC GAGGAGACTA AAACAGTCAC AAACGCCAAG GCTATGAAAG GTTGGTAGCA AGTCTGCTTC TAATTTTTAT TAAGTGGTGT ATAAATTTCT CACAATGAAA GCAATATACG ACTGCGTGTC CATCAAATTT TATTGATAGC GTGGGATTAG TCTGTCATCG TCCTCGTGTT TCTGAAGGAG TTTTTAAAAC AAGATTTGAC TGTTTATCTA GCCTTGAAAG AGCGAATGGA GAAGGACATT GATGAAGTGA GCAAAGTCGC ACAACACATT AAAGGGAAAA TTGAAGCTCT TGATAAATCG GTACGTAAAA TACCATTTGC ATTCAGCAAC TACAAGGCCC TAATGATGAG TCTTTTTAAG CGAAGAATGT GAACTTAATG TTTTTTTTCT TATGACATGG TACTCTATGT ATGTTGCAGA ATATAGCAAA CCGGAAGAAA CCAAACTGCG GTGAGGGCTC AAGTACAGAT CGCACTCGGA TGTCGATGAC TGCGTACGTG CTCGTCACAT GTCCTTTGTC CTTGATTGGC CACGTAAAAT ATGGCTGTGA AATCGAGTTT GCTTGTATGA TTTTTATACT TCTCTGTTGA TTCAGAATTC TTTTCCTTCA GGTATGCATA GCCAACCGTG TAGAGGTCTC TTTACTAGTA TCTGTTCTTG ATCATTGTTG TCCATTGATT GGTTGGTCTC CTTCATACTT AAAAGGGACG TAGTTCATTT TGAAGTCGTC AGTCTGTTTT CAAACAGCTG CTAATGAACA AATTGATTGT TTACATACTT GATTGTCACA TCTGGCTAGC TTATGAATTC CTTACCTTAA GTATGAACTC GTGCCTCATC CTTTCATCCT AATTGCATAT GTGCCAATAA CTGCCTTCAG CTAACGAGGC AAATGCTTGC TTGTCATGCG AATTGCAGGA CCTTGAAAAA GAAGCTGAAA GAGCTGATGA CTGAATTTCA GGCAAGCAAT AAAATACAAG ACCCATGTAG GGGAGCCTTA GGAAGAAGTA CCAGACACAG AAAGAAATAT ATGCGGATTT GTTTCAACTT CTGTTATCTG CCTAGACGGA ATGCATTGTG GTCAGGTTTT GTAGCACCAG CACTGCTCCA CATTAATTTG TTCTTTTATA ATGGCTTGGG TCCCACAGGC ATTGAGGCAG AAGTTCACTG ACGAATACCG CGAAGTGGTA GAAAGACGTG TTTTTACAGG TACTAGTTCT TTACTCTTTG ATCGGTTTCA TTGGTTGCCC CTTGAGGTTA CTTGTGCTTC CCTTGTCGTT TGATCTTGCA TACTGGTATT TGAAAAGTTT GGGGAGGGAA CTTTGAAAGC AATTCCTTGT ACAATGCATG ATTTCTAAGT GTAATGCATA TTACGCTCAC CTTCCCACCT TATTGTCTCT GAACCTCAAC CTAAACTCTG CAAGTGATTT GTGAAGAATC TACTTAAGAA AATGGTTAAT CGCCGACACT TGATTACACG TTGTTCTCAG CTTGACATGA CTCTGATCCT TTTTGACATC TGCTTGTGTG TAATGGACAG TAACTGGACA GAAGGCTGAT GAAGGGGTAA GTAAATTTGT AACCATACAA TCCCTAAAGA TGGCAATGAC AGATGGTTTT TCTAACATAT CATGTAGTTA TCTAGCTGAA TTCGAGTTGA AGCTTGGTTC AAAGTAGGGA GTCCTACACC GAGATTTCTG CTCTGGAACT CAGGAGTATT GCTCAGAATC TACCTGAGGG TTAGATTGTC TGTGAGCAAG CCATGGCAAG AGAGTGTACA GGACCTGCTG TGGTAGGGCA GACAACAGTT TCGTCGAGTA CAGAAACGGG CAGTTCATGA TTGTGGTTCC GCTTTGTGGA CTGCAGACCA TTGACCAGCT GATAGAAACT GGGGATAGTG AACAAATTTT TCAGAAGGCC ATTCAAGAAC AAGGGCGAGG CCAGGTGAGC AGGTTTAATT TTACCAGACA GCTCTTTGGT GTAAAATTCT TAGATTTAGA TAGAGTTTTA TCCTGCTTTG CTAACGTGGT GCGGTCCTGT AGATTTTGGA CACAATTGCT GAAATTCAAG AGCGACATGA TGCCGTGAAG GATATCGAGA AGAAACTTCT GGAACTACAC CAGGTGCATA TATATGACTT AACTCTTGAT ATGTGCCAAT AGTTTTAGCA TAATTTTGCA GGGATCAATT AAATTCAAGT ATTTGGAGGG AGATTTACTT CTGGTTGTTT CGTTGTACAG ATATTTTTGG ATATGGCCGT ACTAGTTGAG GCACAGGGAG AGCTGCTCGA CAATATCGAA ACTCAGGTGT GCTGTCACAT ATCTATTTTT TCTTCAGCTT ATCATGCACT ACATATGGGC CTTTTTTATG TTATGTTTTT GTCGCTATTT TTAAATAGTA ATAAGCTTAC ACTGCGTCGA AAATCTTCCT TTGGGGAATA GATGGATTCT GCCCTACAGC CCCTTTGCAG ATATGTTACC TTCTAACCTA CGAGCAATCG ATTGTACCTT CGAATGTTAT ACTTAAACGC GACTGTAAGT GGCATCTGAA GGACAGGAAG CCCATATACA AATGTGATAA CTATTTCTCA TTTAGACATT TTGTTGACAA GCAGACATGG TATCGTTCTA TTGCGTATGC AGGTATCAAA AGCCGTGACA TATGTCCAAG AGGGTACAGT TGCGTTGCAG ACAGCCAAGA AGCTGCAAAG AGGCACCCGG AAGTGCATGT GTATTGCAAT TATATTGTTA CTTATCATCA TCATCATCAT AGTCGTTGCG GTCGTTCAGC CTTGGAAAAC AAACAAAGCA TGATAAAGCT CTGGGAGTTT GTATCCTGTG TTTGAAATTG CTATCGGCCC ATCTTGTATC TCATTCGGTT GGGTGTACAG AATTCTCGTG TTGGAAATTT TCGAGTTTAC TAACCTGCAG AAAATGCTAT GTTATTTTCT TTATCTTCCT CATGAGGTTG GTTTTGACAG GTTGGGCTTT TAGGTTGGAT GGTATTTGAA TGTAGATCTT CCGGGAGGCA TTCATTGTAA AGGAAATTGC CCATGTAAAG CATAAGGAAT AGCGCATGGG CAGTCGATTC TTTAATAAAG TGTATCAAAT TATTCTTTCC ACCATATCAA ACGATATATG GTGTAAACTC AGGTGTTGGA TAAATTAACC GCCCAGGTCT GCAATGTAGA ACTTTACTGT AAGACGAGGA CATTTGGCGC TGATTTTTTC ACACAGCTAT TCTGTTTC |
mRNA UTR + CDS |
>Mapoly0009s0005.1 GACAGGGAGG GTGGTGGCAA GCGAGGGAGC GAGCGAGCGA GGAGACGGAG GGAGGGGGCA GGAGGAGAGT GTGCAGGAAA GGGAGCTGCG TATGAAAGAG AATGGTAGTT ATAGATTTTT GTTGTTGCTC TCTGTGTTTT CGGGGCGCCG ATTTGATCGG CAGGCAGCCG GGTGGGTGTC GTGGCCAGTT GCTGACTGAC TGCATCACGC CGGGGAGTGG GATTGTTGCT GTTGCGGAGT AGGAGGCCGA ATGAAGCAGG AAAAAGCGGG AGCAGCAGGA CAGGGACCAG TGCGGCAGCA ACATTGGGTT GGGAGCGAAT TCTTCCTAGA GTTGGTTGTG TGGTGAGCAC ACTAGAAAAT TTCCGGTCAC AGCAGATTAC GGAGGAGCGG CAAGAATCAG GATTGTGACT AGGCTGCTGT TGTTGCTATT CGCCGGGTCG TCTTCTTTTG TCGTGCGCGC GGAAGCAGAC GGGGCGTGGT GCTGCTGCAA TTCGCATTCG GCAGGGTTTA GTTTATTGGT CTCGACGAAC AGGATAGAAA TTGCGTAATT GAATCCAGGT TCAGCAGTAA GCCAAGCAGG CGGCAATCAT GAACGATCTT TTAGGGGAGT CCGGTCGCCA CTCGACTTCA GCTCAAGACG TTACCGGGAA CGGTAGAGAG AAAAATGGCA AGGATAATAA TGATCTTGAG GCAGGACCAT CTGGAACGCC GGATGGTGGA GCAGACATGC TTCAGTTTTT CAACGAGGTC GGTGTCATTA AGACTGACAT GGCACAGATT CGAAAAAACT TGGCCAAGCT TCAGGATGCT CACGAGGAGA CTAAAACAGT CACAAACGCC AAGGCTATGA AAGCCTTGAA AGAGCGAATG GAGAAGGACA TTGATGAAGT GAGCAAAGTC GCACAACACA TTAAAGGGAA AATTGAAGCT CTTGATAAAT CGAATATAGC AAACCGGAAG AAACCAAACT GCGGTGAGGG CTCAAGTACA GATCGCACTC GGATGTCGAT GACTGCGACC TTGAAAAAGA AGCTGAAAGA GCTGATGACT GAATTTCAGG CATTGAGGCA GAAGTTCACT GACGAATACC GCGAAGTGGT AGAAAGACGT GTTTTTACAG TAACTGGACA GAAGGCTGAT GAAGGGACCA TTGACCAGCT GATAGAAACT GGGGATAGTG AACAAATTTT TCAGAAGGCC ATTCAAGAAC AAGGGCGAGG CCAGATTTTG GACACAATTG CTGAAATTCA AGAGCGACAT GATGCCGTGA AGGATATCGA GAAGAAACTT CTGGAACTAC ACCAGATATT TTTGGATATG GCCGTACTAG TTGAGGCACA GGGAGAGCTG CTCGACAATA TCGAAACTCA GGTATCAAAA GCCGTGACAT ATGTCCAAGA GGGTACAGTT GCGTTGCAGA CAGCCAAGAA GCTGCAAAGA GGCACCCGGA AGTGCATGTG TATTGCAATT ATATTGTTAC TTATCATCAT CATCATCATA GTCGTTGCGG TCGTTCAGCC TTGGAAAACA AACAAAGCAT GATAAAGCTC TGGGAGTTTG TATCCTGTGT TTGAAATTGC TATCGGCCCA TCTTGTATCT CATTCGGTTG GGTGTACAGA ATTCTCGTGT TGGAAATTTT CGAGTTTACT AACCTGCAGA AAATGCTATG TTATTTTCTT TATCTTCCTC ATGAGGTTGG TTTTGACAGG TTGGGCTTTT AGGTTGGATG GTATTTGAAT GTAGATCTTC CGGGAGGCAT TCATTGTAAA GGAAATTGCC CATGTAAAGC ATAAGGAATA GCGCATGGGC AGTCGATTCT TTAATAAAGT GTATCAAATT ATTCTTTCCA CCATATCAAA CGATATATGG TGTAAACTCA GGTGTTGGAT AAATTAACCG CCCAGGTCTG CAATGTAGAA CTTTACTGTA AGACGAGGAC ATTTGGCGCT GATTTTTTCA CACAGCTATT CTGTTTC |
CDS |
>Mapoly0009s0005.1 ATGAACGATC TTTTAGGGGA GTCCGGTCGC CACTCGACTT CAGCTCAAGA CGTTACCGGG AACGGTAGAG AGAAAAATGG CAAGGATAAT AATGATCTTG AGGCAGGACC ATCTGGAACG CCGGATGGTG GAGCAGACAT GCTTCAGTTT TTCAACGAGG TCGGTGTCAT TAAGACTGAC ATGGCACAGA TTCGAAAAAA CTTGGCCAAG CTTCAGGATG CTCACGAGGA GACTAAAACA GTCACAAACG CCAAGGCTAT GAAAGCCTTG AAAGAGCGAA TGGAGAAGGA CATTGATGAA GTGAGCAAAG TCGCACAACA CATTAAAGGG AAAATTGAAG CTCTTGATAA ATCGAATATA GCAAACCGGA AGAAACCAAA CTGCGGTGAG GGCTCAAGTA CAGATCGCAC TCGGATGTCG ATGACTGCGA CCTTGAAAAA GAAGCTGAAA GAGCTGATGA CTGAATTTCA GGCATTGAGG CAGAAGTTCA CTGACGAATA CCGCGAAGTG GTAGAAAGAC GTGTTTTTAC AGTAACTGGA CAGAAGGCTG ATGAAGGGAC CATTGACCAG CTGATAGAAA CTGGGGATAG TGAACAAATT TTTCAGAAGG CCATTCAAGA ACAAGGGCGA GGCCAGATTT TGGACACAAT TGCTGAAATT CAAGAGCGAC ATGATGCCGT GAAGGATATC GAGAAGAAAC TTCTGGAACT ACACCAGATA TTTTTGGATA TGGCCGTACT AGTTGAGGCA CAGGGAGAGC TGCTCGACAA TATCGAAACT CAGGTATCAA AAGCCGTGAC ATATGTCCAA GAGGGTACAG TTGCGTTGCA GACAGCCAAG AAGCTGCAAA GAGGCACCCG GAAGTGCATG TGTATTGCAA TTATATTGTT ACTTATCATC ATCATCATCA TAGTCGTTGC GGTCGTTCAG CCTTGGAAAA CAAACAAAGC ATGA |
Protein |
>Mapoly0009s0005.1 MNDLLGESGR HSTSAQDVTG NGREKNGKDN NDLEAGPSGT PDGGADMLQF FNEVGVIKTD MAQIRKNLAK LQDAHEETKT VTNAKAMKAL KERMEKDIDE VSKVAQHIKG KIEALDKSNI ANRKKPNCGE GSSTDRTRMS MTATLKKKLK ELMTEFQALR QKFTDEYREV VERRVFTVTG QKADEGTIDQ LIETGDSEQI FQKAIQEQGR GQILDTIAEI QERHDAVKDI EKKLLELHQI FLDMAVLVEA QGELLDNIET QVSKAVTYVQ EGTVALQTAK KLQRGTRKCM CIAIILLLII IIIIVVAVVQ PWKTNKA |