Mapoly0030s0125



Description

RETINOBLASTOMA BINDING PROTEIN-RELATED

Annotation

Database ID Description
PFAM PF08429 PLU-1-like protein
GO GO:0003677 DNA binding
GO GO:0055114 oxidation-reduction process
KOG KOG1246 DNA-binding protein jumonji/RBP2/SMCY, contains JmjC domain
PFAM PF00628 PHD-finger
GO GO:0005515 protein binding
PFAM PF02373 JmjC domain, hydroxylase
GO GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
PANTHER PTHR10694:SF8 RETINOBLASTOMA BINDING PROTEIN-RELATED
PFAM PF01388 ARID/BRIGHT DNA binding domain
GO GO:0005634 nucleus
GO GO:0005622 intracellular
PFAM PF02375 jmjN domain
PANTHER PTHR10694 JUMONJI DOMAIN CONTAINING PROTEIN
PFAM PF02928 C5HC2 zinc finger

Nomenclature

Gene symbol Product Transcript ID Status
MpARID2 transcription factor, ARID Public

Transcript models

Transcript ID Location Sequences Extract region
Mapoly0030s0125.1 scaffold_30:1410160..1433508 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.