Mapoly0068s0088



Description

ethylene-responsive transcription factor 2

Annotation

Database ID Description
GO GO:0006355 regulation of transcription, DNA-dependent
PFAM PF00847 AP2 domain
PANTHER PTHR31190 FAMILY NOT NAMED
GO GO:0003700 sequence-specific DNA binding transcription factor activity
KEGGORTH K14517 ethylene-responsive transcription factor 2

Nomenclature

Gene symbol Product Transcript ID Status
MpERF15 transcription factor, AP2/ERF, potential ortholog of AtERF1 Published
MpERF15 is assigned to Mapoly0068s0088 (Mp7g09350) in the Table S7 (List of TF in Mp) of the genome paper, which is sequentially numbered in the ascending order of the Mapoly gene number. Whereas in Table S8, Mapoly0068s0088 is assigned with MpERF1 based on the homology to AtERF1. For consistency with all the ERF-family genes (MpERF1-MpERF23) defined in Table S7, we recommend to use MpERF15 to denote Mapoly0068s0088 (Mp7g09350) and to use MpERF1 to denote Mapoly0001s0341 (Mp1g20040). Note also that 'MpERF1' referred to in Li et al. (Nature Plants, 2020) corresponds to MpERF15 in this database.

Transcript models

Transcript ID Location Sequences Extract region
Mapoly0068s0088.1 scaffold_68:782766..784778 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.