Mapoly0122s0054



Description

phytochrome B

Annotation

Database ID Description
GO GO:0016020 membrane
PFAM PF00989 PAS fold
PFAM PF08446 PAS fold
GO GO:0006355 regulation of transcription, DNA-dependent
PFAM PF00360 Phytochrome region
GO GO:0005515 protein binding
GO GO:0007165 signal transduction
PANTHER PTHR24423 TWO-COMPONENT SENSOR HISTIDINE KINASE
GO GO:0018298 protein-chromophore linkage
KEGGORTH K12121 phytochrome B
PFAM PF00512 His Kinase A (phospho-acceptor) domain
GO GO:0000155 phosphorelay sensor kinase activity
PANTHER PTHR24423:SF414
PFAM PF01590 GAF domain
GO GO:0009584 detection of visible light

Nomenclature

Gene symbol Product Transcript ID Status
MpPHY Red light/Far-red light receptor PHYTOCHROME Published

Transcript models

Transcript ID Location Sequences Extract region
Mapoly0122s0054.1 scaffold_122:458802..464258 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.