syntaxin 1B/2/3
Database | ID | Description |
---|---|---|
GO | GO:0016020 | membrane |
KEGGORTH | K08486 | syntaxin 1B/2/3 |
GO | GO:0005515 | protein binding |
PANTHER | PTHR19957 | SYNTAXIN |
PFAM | PF00804 | Syntaxin |
KOG | KOG0810 | SNARE protein Syntaxin 1 and related proteins |
PANTHER | PTHR19957:SF80 | |
PFAM | PF05739 | SNARE domain |
Gene symbol | Product | Transcript ID | Status |
---|---|---|---|
MpSYP12A | Common ortholog of both Arabidopsis SYP11 and SYP12 genes | Published |
Sequences: |
Gene UTR + CDS + intron |
>Mapoly0163s0015.1 CGAAAATTCT GGTCCCTGAA CTGGACTTGT GTAGGTGCTT GCGTTCTCCA AAATTTGGAT TGTGTGCGTC CAGCTTGACT CCTTGAGACT TTCCGGGTTG TAGAACCAGG CTTGTCAACG GTGGAGTGAT CTGCCAAAAT GAACGATCTT CTGCAGAAAA CGTACTCTGG TGGGCGAGGG TACTTGAACA TGCGGGATGT GGAAAAGTTG GGAGGCGAGA TGGAAATGCA AGGCATTGAT CCGGAGAAGA ATCTGGCTAG CTTCTTCGAT GAAGTGAATG TCATCAAGAC TGATATGGAA AGAATCAAAT CGCTTTTGGC CAAACTTCAA GATTCAAACG AAGAAAGCAA GACCATACAC AAGGTGCAAG CTATGAAAGC TCTCAGGGAT CGCATGGACA AGGACTTGGC GGAGGTCAGT AAAGTAGCCA GATCTGTTAA GCAGAAGTTG GAAGAGCTGG ACAAAGCCAA TGCTGCTAGT CGACGGACGA AAGGATGTGA GGAGGGCACA CCTACTGATC GAACGAGATC TTCGATAACC AATAGTCTCA CGAAGAAGCT GAAGGATCTT ATGGAGTCCT TCGGCACGCT CCGTTCAAAG ATTATGGTAG AGTACAGGGA AACTATAGAG CGTCGCTATT ACACTGTCAC CGGTCAGAAG CCAGACGAGG AAACTCTTGA GCAGATTATC GATACGGGTG AGAGTGAAAA TTTCTTGCAG AAGGCAATTC AGGAGCAGGG TCGGGGTCAG ATTATTGAAA CTATTAAGGA AATTCAAGAA AGACACGACG GAGTCAAGGA GATTGAGAAG AGTCTTCTAG AGCTGCACCA AATTTTCTTG GACTTGGCTG TCCTTGTTGA ATCGCAAGGG ACGGTGCTAG ACAACATTGA GTCACAGGTA AATAGAGCAC ACTCATATGT CGAGAAGGCT GGTGCACATC TTACCGTTGC TAAGAAGCAT CAAAGGAACA CCCGCAAGTG GACGTGTATA GCTATCATCA TCGTTTTGAT TATCATTTTG GTTATTGTTG TTCCCATAGC TACGAGTTTG AAGAAGTAGA CTGTGTTCAT GTATTTTTTT GAAAGTACGG CCGGCTCGTG TAGGCCCCAA GCTCTGAGCT AGATAGTGAA GATAAAGTGA CCTCCTCTAG ATCACCTCGA TCGAATAGTT AGTGATGGAG TTGTCCGGTT TGGTGGATGC CGTCGAGACT TGGAGGCTAC ATGATGAGCG ACGGATCGGT TTTAGAGCTG TCTGATTAGA GAACCTAATC AGTGACTACA CAACAGCAAG CCAACGAACG TCTCCTTAGC TGCCAGGCTT TACATCGTGC TTTAGTTTTT GGAAGGAACT TATTTTTGTT ATAGTAGCTT AAATATTCTC GTTGTAATTA CAACCAAGTG TTTTCAGTAA ATTTGCTACG AATGACACCT ATTTACAGTT GATGGACATG CTGCTGTCGT CGACAAGCGA TATCCTTCAT TCCGTCTGGA TGTGTCTGAC GCTCGTAGCC ACAGTATTCT GGAGCAATTT ATCCTCAGAG CAACACCAAA GGTCTGGGAA GTAGACACTT CGAGAGTACC AGAGTCTGAT GTCCCTCTGA TTCTTCCCTC ATACTTAATT GTAATATATA GGTGTTTGTA ATGTATATTT AGAACGTACA GCCCGTATAT TGTTCTTCAC GCTGTAGGTA TGGCAGTACC CTTGTGACTG TTCACTTCTT GACAATCTTG AAGATCTCAT GGGATGATGT CGGGAACTAA GTCCTGGTGA AAGCACTCTT ATTTCTTACC TTGTGAGTGT AAGCACTGGG GTAGCGATAA TGCTACTGTC AGTAGGACAT ACTGATAGAA AGGGCCGAGG TGCTCGATAT CTGTAAAGTC TCTTGGTGGA ATATCTGGTA A |
mRNA UTR + CDS |
>Mapoly0163s0015.1 CGAAAATTCT GGTCCCTGAA CTGGACTTGT GTAGGTGCTT GCGTTCTCCA AAATTTGGAT TGTGTGCGTC CAGCTTGACT CCTTGAGACT TTCCGGGTTG TAGAACCAGG CTTGTCAACG GTGGAGTGAT CTGCCAAAAT GAACGATCTT CTGCAGAAAA CGTACTCTGG TGGGCGAGGG TACTTGAACA TGCGGGATGT GGAAAAGTTG GGAGGCGAGA TGGAAATGCA AGGCATTGAT CCGGAGAAGA ATCTGGCTAG CTTCTTCGAT GAAGTGAATG TCATCAAGAC TGATATGGAA AGAATCAAAT CGCTTTTGGC CAAACTTCAA GATTCAAACG AAGAAAGCAA GACCATACAC AAGGTGCAAG CTATGAAAGC TCTCAGGGAT CGCATGGACA AGGACTTGGC GGAGGTCAGT AAAGTAGCCA GATCTGTTAA GCAGAAGTTG GAAGAGCTGG ACAAAGCCAA TGCTGCTAGT CGACGGACGA AAGGATGTGA GGAGGGCACA CCTACTGATC GAACGAGATC TTCGATAACC AATAGTCTCA CGAAGAAGCT GAAGGATCTT ATGGAGTCCT TCGGCACGCT CCGTTCAAAG ATTATGGTAG AGTACAGGGA AACTATAGAG CGTCGCTATT ACACTGTCAC CGGTCAGAAG CCAGACGAGG AAACTCTTGA GCAGATTATC GATACGGGTG AGAGTGAAAA TTTCTTGCAG AAGGCAATTC AGGAGCAGGG TCGGGGTCAG ATTATTGAAA CTATTAAGGA AATTCAAGAA AGACACGACG GAGTCAAGGA GATTGAGAAG AGTCTTCTAG AGCTGCACCA AATTTTCTTG GACTTGGCTG TCCTTGTTGA ATCGCAAGGG ACGGTGCTAG ACAACATTGA GTCACAGGTA AATAGAGCAC ACTCATATGT CGAGAAGGCT GGTGCACATC TTACCGTTGC TAAGAAGCAT CAAAGGAACA CCCGCAAGTG GACGTGTATA GCTATCATCA TCGTTTTGAT TATCATTTTG GTTATTGTTG TTCCCATAGC TACGAGTTTG AAGAAGTAGA CTGTGTTCAT GTATTTTTTT GAAAGTACGG CCGGCTCGTG TAGGCCCCAA GCTCTGAGCT AGATAGTGAA GATAAAGTGA CCTCCTCTAG ATCACCTCGA TCGAATAGTT AGTGATGGAG TTGTCCGGTT TGGTGGATGC CGTCGAGACT TGGAGGCTAC ATGATGAGCG ACGGATCGGT TTTAGAGCTG TCTGATTAGA GAACCTAATC AGTGACTACA CAACAGCAAG CCAACGAACG TCTCCTTAGC TGCCAGGCTT TACATCGTGC TTTAGTTTTT GGAAGGAACT TATTTTTGTT ATAGTAGCTT AAATATTCTC GTTGTAATTA CAACCAAGTG TTTTCAGTAA ATTTGCTACG AATGACACCT ATTTACAGTT GATGGACATG CTGCTGTCGT CGACAAGCGA TATCCTTCAT TCCGTCTGGA TGTGTCTGAC GCTCGTAGCC ACAGTATTCT GGAGCAATTT ATCCTCAGAG CAACACCAAA GGTCTGGGAA GTAGACACTT CGAGAGTACC AGAGTCTGAT GTCCCTCTGA TTCTTCCCTC ATACTTAATT GTAATATATA GGTGTTTGTA ATGTATATTT AGAACGTACA GCCCGTATAT TGTTCTTCAC GCTGTAGGTA TGGCAGTACC CTTGTGACTG TTCACTTCTT GACAATCTTG AAGATCTCAT GGGATGATGT CGGGAACTAA GTCCTGGTGA AAGCACTCTT ATTTCTTACC TTGTGAGTGT AAGCACTGGG GTAGCGATAA TGCTACTGTC AGTAGGACAT ACTGATAGAA AGGGCCGAGG TGCTCGATAT CTGTAAAGTC TCTTGGTGGA ATATCTGGTA A |
CDS |
>Mapoly0163s0015.1 ATGAACGATC TTCTGCAGAA AACGTACTCT GGTGGGCGAG GGTACTTGAA CATGCGGGAT GTGGAAAAGT TGGGAGGCGA GATGGAAATG CAAGGCATTG ATCCGGAGAA GAATCTGGCT AGCTTCTTCG ATGAAGTGAA TGTCATCAAG ACTGATATGG AAAGAATCAA ATCGCTTTTG GCCAAACTTC AAGATTCAAA CGAAGAAAGC AAGACCATAC ACAAGGTGCA AGCTATGAAA GCTCTCAGGG ATCGCATGGA CAAGGACTTG GCGGAGGTCA GTAAAGTAGC CAGATCTGTT AAGCAGAAGT TGGAAGAGCT GGACAAAGCC AATGCTGCTA GTCGACGGAC GAAAGGATGT GAGGAGGGCA CACCTACTGA TCGAACGAGA TCTTCGATAA CCAATAGTCT CACGAAGAAG CTGAAGGATC TTATGGAGTC CTTCGGCACG CTCCGTTCAA AGATTATGGT AGAGTACAGG GAAACTATAG AGCGTCGCTA TTACACTGTC ACCGGTCAGA AGCCAGACGA GGAAACTCTT GAGCAGATTA TCGATACGGG TGAGAGTGAA AATTTCTTGC AGAAGGCAAT TCAGGAGCAG GGTCGGGGTC AGATTATTGA AACTATTAAG GAAATTCAAG AAAGACACGA CGGAGTCAAG GAGATTGAGA AGAGTCTTCT AGAGCTGCAC CAAATTTTCT TGGACTTGGC TGTCCTTGTT GAATCGCAAG GGACGGTGCT AGACAACATT GAGTCACAGG TAAATAGAGC ACACTCATAT GTCGAGAAGG CTGGTGCACA TCTTACCGTT GCTAAGAAGC ATCAAAGGAA CACCCGCAAG TGGACGTGTA TAGCTATCAT CATCGTTTTG ATTATCATTT TGGTTATTGT TGTTCCCATA GCTACGAGTT TGAAGAAGTA G |
Protein |
>Mapoly0163s0015.1 MNDLLQKTYS GGRGYLNMRD VEKLGGEMEM QGIDPEKNLA SFFDEVNVIK TDMERIKSLL AKLQDSNEES KTIHKVQAMK ALRDRMDKDL AEVSKVARSV KQKLEELDKA NAASRRTKGC EEGTPTDRTR SSITNSLTKK LKDLMESFGT LRSKIMVEYR ETIERRYYTV TGQKPDEETL EQIIDTGESE NFLQKAIQEQ GRGQIIETIK EIQERHDGVK EIEKSLLELH QIFLDLAVLV ESQGTVLDNI ESQVNRAHSY VEKAGAHLTV AKKHQRNTRK WTCIAIIIVL IIILVIVVPI ATSLKK |