Mp1g04480



Description

Annotation

Database ID Description
KOG KOG0484 Transcription factor PHOX2/ARIX, contains HOX domain; C-term missing; [K]
MobiDBLite mobidb-lite consensus disorder prediction
Coils Coil -
Gene3D G3DSA:1.10.10.60 -
Pfam PF15613 Williams-Beuren syndrome DDT (WSD), D-TOX E motif
SUPERFAMILY SSF46689 -
SMART SM00389 -
ProSiteProfiles PS50827 DDT domain profile.
Pfam PF15612 WSTF, HB1, Itc1p, MBD9 motif 1
Pfam PF00046 Homeodomain
CDD cd00086 homeodomain
Pfam PF02791 DDT domain
Pfam PF05066 HB1, ASXL, restriction endonuclease HTH domain
ProSiteProfiles PS50071 'Homeobox' domain profile.
SMART SM00571 -
MapolyID Mapoly0005s0159
GO GO:0006351 transcription, DNA-templated
GO GO:0006355 regulation of transcription, DNA-templated
GO GO:0003677 DNA binding

Nomenclature

Gene symbol Product Transcript ID Status
MpDDT1 transcription factor, HD, homeodomain protein Published
MpHD1 transcription factor, HD, homeodomain protein Published

Transcript models

Transcript ID Location Sequences Extract region
Mp1g04480.1 chr1:4778639..4791420 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.