Mp3g12500



Description

Annotation

Database ID Description
SMART SM00108 -
ProSitePatterns PS00587 Glycosyl hydrolases family 17 signature.
SUPERFAMILY SSF51110 -
Gene3D G3DSA:3.20.20.80 -
SUPERFAMILY SSF51445 -
ProSiteProfiles PS50927 Bulb-type lectin domain profile.
Pfam PF00332 Glycosyl hydrolases family 17
Gene3D G3DSA:2.90.10.10 -
Gene3D G3DSA:2.90.10.20 -
MapolyID Mapoly0050s0050
GO GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
GO GO:0005975 carbohydrate metabolic process

Nomenclature

Gene symbol Product Transcript ID Status
MpGH17.12 Cell wall related protein Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp3g12500.1 chr3:12245966..12247695 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp3g12500.2 chr3:12245471..12247695 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.