Liftover: Convert genomic coordinates between reference genomes


Input format: BED (up to 100 lines)

Example:
MpTak_v7.1, MpTak_v6.1, Male (MpTak1_v7.1), Female (MpTak2_v7.1): chr1 18887478 18900785 [additional columns..]
JGI3.1: scaffold_1 1572812 1586118 [additional columns..]

Multiple lines of input are accepted. Lines where liftover failed will not be displayed in the result.




This website uses transanno to create chain files and to convert coordinates between genomes, and currently BED format is supported.
If you want to convert VCF or GFF, or larger BED files, please download chain files from here to run transanno or CrossMap.