Mp2g16090



Description

Annotation

Database ID Description
KEGG K12121 PHYB; phytochrome B
PRINTS PR01033 Phytochrome signature
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
ProSiteProfiles PS50113 PAC domain profile.
PANTHER PTHR43719 TWO-COMPONENT HISTIDINE KINASE
Pfam PF00989 PAS fold
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ProSiteProfiles PS50112 PAS repeat profile.
Gene3D G3DSA:1.10.287.130 -
SMART SM00091 pas_2
Gene3D G3DSA:3.30.450.270 -
PANTHER PTHR43719:SF4 PHYTOCHROME C
Gene3D G3DSA:3.30.450.20 -
SUPERFAMILY SSF55781 GAF domain-like
ProSiteProfiles PS50046 Phytochrome chromophore attachment site domain profile.
SMART SM00387 HKATPase_4
TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein
Pfam PF00360 Phytochrome region
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain)
Gene3D G3DSA:3.30.565.10 -
PIRSF PIRSF000084 Phytochrome_conventional
Pfam PF08446 PAS fold
Gene3D G3DSA:3.30.450.40 -
SMART SM00388 HisKA_10
CDD cd00082 HisKA
Pfam PF00512 His Kinase A (phospho-acceptor) domain
SMART SM00065 gaf_1
CDD cd00130 PAS
ProSiteProfiles PS50109 Histidine kinase domain profile.
Pfam PF01590 GAF domain
ProSitePatterns PS00245 Phytochrome chromophore attachment site signature.
CDD cd16932 HATPase_Phy-like
GO GO:0009881 photoreceptor activity
GO GO:0042803 protein homodimerization activity
GO GO:0007165 signal transduction
GO GO:0009585 red, far-red light phototransduction
GO GO:0006355 regulation of transcription, DNA-templated
GO GO:0005515 protein binding
GO GO:0009584 detection of visible light
GO GO:0000155 phosphorelay sensor kinase activity
GO GO:0017006 protein-tetrapyrrole linkage
GO GO:0018298 protein-chromophore linkage
MapolyID Mapoly0122s0054 -

Nomenclature

Gene symbol Product Transcript ID Status
MpPHY Red light/Far-red light receptor PHYTOCHROME Published

Transcript models

Transcript ID Location Sequences Extract region
Mp2g16090.1 chr2:17189291..17195570 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.