Mp1g26670
Description
Annotation
| Database | ID | Description |
|---|---|---|
| MapolyID | Mapoly0002s0211 | - |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpMIR160 | miRNA | Published |
Negatively regulates MpARF3 (class C ARF), consisting of a steady state feedback loop with MpARF3.
Associated Literature (AI-based literature mining, Beta-version)
miR160 precursor functionally manipulated via CRISPR (Mpmir160 mutants) and analyzed by DGE alongside Mparf3; targets the class C ARF MpARF3, defining the studied regulatory module.
1 core 7 peripheral
Flores-Sandoval, E., et al. (2018b)
· Frontiers in Plant Science research experimental subject
miR160 precursor functionally manipulated via CRISPR (Mpmir160 mutants) and analyzed by DGE alongside Mparf3; targets the class C ARF MpARF3, defining the studied regulatory module.
Bowman, J. L., et al. (2016a)
· Plant and Cell Physiology review citation background
miRNA gene locus example
Alisha A, Jarmolowski A, Szweykowska-Kulinska Z, Sierocka I. (2026)
· The Plant journal : for cell and molecular biology research experimental tool
The MpmiR160 precursor backbone was used as the scaffold for the artificial miRNA designed to knock down MpSPL3.
Jones, V. A. S., et al. (2017)
· Development research experimental tool
Used as the backbone scaffold for building artificial microRNAs (amiR-MpWIP) targeting the MpWIP 3' UTR and CDS.
Kock C, Helmig J, Gutsche N, Dierschke T, Müller-Schüssele SJ, Zachgo S. (2025)
· The Plant journal : for cell and molecular biology research experimental tool
The MpMIR160 precursor served as the artificial microRNA scaffold for constructing the MpGSH1 knockdown vector.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp1g26670 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp1g26670.1 CAGAAGTGCA AGGCCAGGCG AGAGACGAGA AGCCGAGAGC AGAGGAGGGA GAGAGTGAGT GAGTGAGAGA GAGAGGAGGA TTTCGGTGGT AGGACCCTGT AGGAACGAAA GACTTAAAGC GAGTTCCGGT TTCCACTTGA GGGAGCCCGA TGTCATGCTC TGCGTGATTG CGATTATATT TGAGTTTCGG AGGGCCTGGG GAGAGAAGTG GGAAGAGTCT GAAGAAAGAG AGAGAGAGAG AGAGAAGATA CGAGAAGAGG CCGTGCGAAG GTGTAGAGGA GGGGGAGGGC GTGGGGAGGG GAGAAAGGAA CACTCGCAGT GCCGATCCGG CAGCAGCAAT GCAGGCGAGG GCAGTGTTTC GTTGGTGATA GATATCTATA GAAGGAGAGG GAGCAGCAGC AGAAGGGGGG GGGGGGGGGG GGGGGAGGTA GAAGAGACAA GATGTCAGTT CCGAAGACCG TCCCTCGACA GTGGGACCGA CAGCTGGGGA AATTTCTGTC AGAGCGCATC GAGTTAGTTG TGGTTACACT CGTCGCGAAG AATTTTTCTG CTTCGACCTC ATAAATGGGT CGACTTGTTG GCCTGCTGTG CAGTCATTGC GTTAAAAGAC AACTTGTGCC GGTTGCAGCG TAAGATTGAA ACACCTCGCG CAACTGGAGA CCTAGAGAGC CTCCGACCCC CGACCCCCCC CGAGCGCGCG CCCAGAGGCC GAGGTGGTTA GAGAGAGGGA GAGAGAAAAG CGACACGAAC GAACAAACGC ACCCCCCCTT CCCTTCCCCT TCCCTTCCCT TCCTTCCCCT AGGCCGCACC ACACCAACGG AACTGTGACC CCCCGCCCTG AGCAGCGAGG TTTTTCTGGA CACCCATCCT TCTCCTGTCA GTAGAATACA GTCGTAGCGT AGCACGAGAG AGACGGATAG AGAAGGGAGG GGGCGGCCGG GCGAGCGTGA GGCGTGGCGA TGGGAGCGAA GCTCAAATCC TTTTCTTTCT TTCTTTTTGA CACGTCCCGC TCACTGACCC ACTCACTGGC TGATTACGAT TTAGCCCGGG CGATGGGTGA GATTGTCACA CTCACTCACA ACCCTCGTCT CCCCGCGGGC GTTCCGACTT TCTTCATCGA AGGGCACACT CGGTTGGGGT CGCGAGCTCG AGCGACAATT TTGTGAATCG ATCTGCCGCA CCTCCTCTCT CCGACTGCAG CCCGTTTCGA GATCCGAGGA CTTGCTCGAC GCGACTAATT GGGGAGGCCA GACTGCACTT GCCTGGCTCC CTGTATGCCA ACTGAGGAGC TCCTCAGAGA CCTTGACAGG CTCCGTAGCT GGCATTCAGG GGGCCATGCA GGAGAAGTCG CTACCTCCCG CAAGGTGCGA CTAGCTTTCT GTCTTGGGTG CACACCTCAC TGATGTTTGA TAGATTTACT TACTTGCTTG AGAGGCCTGA TCATCTCGTG CGTTAGTGTC GAATTTTTCG TGCATTATAT GATGAAATAT TGGAGGTCGT GCGCGAGGGT TCGGTGGTTG ATTCTTCTGT GGAAAGGTCA TACACGGGGT CAGTGTTTCT GGTGGAATAG ATTAGTCAGC AGCCGTGTGC GTATTTTGTG CTTCTAATTC CTTAACGATG ATTCCTTGTG GGTTGCAGTC CCTTTCTGTA TGCTAGACAA TGTGCGTGGA ATTTGGTTTC TCACGTTTCG TGATCACGGT TGTGGGATGT GTACATGGTG TGAGGGTTCC CTTTTGTCTT TTCTATTCTC GTTGGTTTTT GGGGTGGTGG TCAGATGTGG CCAGCTTGTG GGTAGGAGTT CTGATAGTTG CTACTCTCGG CTGGTGGTGT CCATCCATCC GTGCAAATTT CGACGTGTTT TGAAATGCCC GTCGATACCA GCGTCGAGAG GTGCGACAGT CACCCAGCTG GACGAGCTTT CTTAGCGCTC ACGAAGAACG GAGGAAATCA GAAGCATCAG TCCTGCAGAG AATTAGTATA TGTTGCGAGA AGTCAGAACG CTCACTCTCA ATTACTTCGA GATCTGAATT GCAGGACGTT AGTCGCTCAG TGAGTGTTCT ACAGCTGGTG GAGTACACAA AAATGAAGCT CTCCGAAGCT CGTTCCAGCT CGTTGTCAGA TGTGTTGCAT TGGCACCGAC CGATTCTCGC AAAGCAACAA GCTATCGTAC GACGAGTGTA CACCCAAATA TGCCGGAGTA CATCACTGTT GCACATTCGA TTAATTCAAG CAGAACTGTC CAAGCGGCAG CACCAGATCA AAAGCTGCAG CTGCAAGATG GTACACTTCT GCGAGGGCTG CGGTTTTCCA TGCGAAGTCT AGGTCTGGCA CCAACTACTG TAGTGCTAAC CAATACTCAA GTCTTTCCTG CATATGAGGA ATATTGAGAT ATTGGCTACC AGCTTTTGAG AAACCCATTC AGGTGTTGTG GTACTTCCCC GACAATGCGT CGACTGCCCG TATTATTGGC TCGGATCTAC GGAGCTACAA ATGCTTGTCA TGTGACGCTC ATCGGTTTTT TTCACCCTAG CTCTGATCAC AAATTGAATG ACTCGTCAGT CACTGGTGAT CTCAGGTGGA CAAGGCTGCA ATGGCTGCCT TTCAGATTTC CAGGGATGTG AAAGGATCAC AGAAGTGCAG ACGCACCTCT GCTTCCAAGG ATCGCGCTGC TGTTGGTCAT TAAATCCACA TGGCTCGTGG TTCGTGAAGG AAGATTCGGT TCTGATCAAA CATATCTCAA CATTATACAG TGACCTAAGG CCGTGCATTA TTGATTCACT TCTGCTCAGT CAGTTATTAC AGTGAAAGCG GTCTGGGACA ATAATTATTC CAGATACCGC TTTGTTTACG GTGTCGAGAA CTGCCAGGTT TTAGCAGAAG ATTCTCTCCT AGTGATTAGG ACCTCGAAAC TTCCAAGTAT ATTGCTTACA GCTTTACAGG TCCATGCCGA TTTGAACACC CGTCACAGTT ACTTCTCTAT CAGAATACAC CACTCTCACC CGTGTACATT AAATGTAGAT GTTGATTTTA CTGTACTAGC TCCAGATCAT ATCTATATTA GGAGGGAGGA AGAGTTTAGG GAGGAGAACT CATGGACGCT ATGAGCGTCT ACCTTCGTGC TCTAAATGAG AGTCGAAGAT GGTTATAGAG CTTGCTCTGA AGTACATGCT GACGCTTGGA TCAGCTAGTA AAGGGCCC |
mRNA UTR + CDS |
| >Mp1g26670.1 CAGAAGTGCA AGGCCAGGCG AGAGACGAGA AGCCGAGAGC AGAGGAGGGA GAGAGTGAGT GAGTGAGAGA GAGAGGAGGA TTTCGGTGGT AGGACCCTGT AGGAACGAAA GACTTAAAGC GAGTTCCGGT TTCCACTTGA GGGAGCCCGA TGTCATGCTC TGCGTGATTG CGATTATATT TGAGTTTCGG AGGGCCTGGG GAGAGAAGTG GGAAGAGTCT GAAGAAAGAG AGAGAGAGAG AGAGAAGATA CGAGAAGAGG CCGTGCGAAG GTGTAGAGGA GGGGGAGGGC GTGGGGAGGG GAGAAAGGAA CACTCGCAGT GCCGATCCGG CAGCAGCAAT GCAGGCGAGG GCAGTGTTTC GTTGGTGATA GATATCTATA GAAGGAGAGG GAGCAGCAGC AGAAGGGGGG GGGGGGGGGG GGGGGAGGTA GAAGAGACAA GATGTCAGTT CCGAAGACCG TCCCTCGACA GTGGGACCGA CAGCTGGGGA AATTTCTGTC AGAGCGCATC GAGTTAGTTG TGGTTACACT CGTCGCGAAG AATTTTTCTG CTTCGACCTC ATAAATGGGT CGACTTGTTG GCCTGCTGTG CAGTCATTGC GTTAAAAGAC AACTTGTGCC GGTTGCAGCG TAAGATTGAA ACACCTCGCG CAACTGGAGA CCTAGAGAGC CTCCGACCCC CGACCCCCCC CGAGCGCGCG CCCAGAGGCC GAGGTGGTTA GAGAGAGGGA GAGAGAAAAG CGACACGAAC GAACAAACGC ACCCCCCCTT CCCTTCCCCT TCCCTTCCCT TCCTTCCCCT AGGCCGCACC ACACCAACGG AACTGTGACC CCCCGCCCTG AGCAGCGAGG TTTTTCTGGA CACCCATCCT TCTCCTGTCA GTAGAATACA GTCGTAGCGT AGCACGAGAG AGACGGATAG AGAAGGGAGG GGGCGGCCGG GCGAGCGTGA GGCGTGGCGA TGGGAGCGAA GCTCAAATCC TTTTCTTTCT TTCTTTTTGA CACGTCCCGC TCACTGACCC ACTCACTGGC TGATTACGAT TTAGCCCGGG CGATGGGTGA GATTGTCACA CTCACTCACA ACCCTCGTCT CCCCGCGGGC GTTCCGACTT TCTTCATCGA AGGGCACACT CGGTTGGGGT CGCGAGCTCG AGCGACAATT TTGTGAATCG ATCTGCCGCA CCTCCTCTCT CCGACTGCAG CCCGTTTCGA GATCCGAGGA CTTGCTCGAC GCGACTAATT GGGGAGGCCA GACTGCACTT GCCTGGCTCC CTGTATGCCA ACTGAGGAGC TCCTCAGAGA CCTTGACAGG CTCCGTAGCT GGCATTCAGG GGGCCATGCA GGAGAAGTCG CTACCTCCCG CAAGGACGTT AGTCGCTCAG TGAGTGTTCT ACAGCTGGTG GAGTACACAA AAATGAAGCT CTCCGAAGCT CGTTCCAGCT CGTTGTCAGA TGTGTTGCAT TGGCACCGAC CGATTCTCGC AAAGCAACAA GCTATCGTAC GACGAGTGTA CACCCAAATA TGCCGGAGTA CATCACTGTT GCACATTCGA TTAATTCAAG CAGAACTGTC CAAGCGGCAG CACCAGATCA AAAGCTGCAG CTGCAAGATG GTACACTTCT GCGAGGGCTG CGGTTTTCCA TGCGAAGTCT AGGTCTGGCA CCAACTACTG TAGTGCTAAC CAATACTCAA GTCTTTCCTG CATATGAGGA ATATTGAGAT ATTGGCTACC AGCTTTTGAG AAACCCATTC AGGTGTTGTG GTACTTCCCC GACAATGCGT CGACTGCCCG TATTATTGGC TCGGATCTAC GGAGCTACAA ATGCTTGTCA TGTGACGCTC ATCGGTTTTT TTCACCCTAG CTCTGATCAC AAATTGAATG ACTCGTCAGT CACTGGTGAT CTCAGGTGGA CAAGGCTGCA ATGGCTGCCT TTCAGATTTC CAGGGATGTG AAAGGATCAC AGAAGTGCAG ACGCACCTCT GCTTCCAAGG ATCGCGCTGC TGTTGGTCAT TAAATCCACA TGGCTCGTGG TTCGTGAAGG AAGATTCGGT TCTGATCAAA CATATCTCAA CATTATACAG TGACCTAAGG CCGTGCATTA TTGATTCACT TCTGCTCAGT CAGTTATTAC AGTGAAAGCG GTCTGGGACA ATAATTATTC CAGATACCGC TTTGTTTACG GTGTCGAGAA CTGCCAGGTT TTAGCAGAAG ATTCTCTCCT AGTGATTAGG ACCTCGAAAC TTCCAAGTAT ATTGCTTACA GCTTTACAGG TCCATGCCGA TTTGAACACC CGTCACAGTT ACTTCTCTAT CAGAATACAC CACTCTCACC CGTGTACATT AAATGTAGAT GTTGATTTTA CTGTACTAGC TCCAGATCAT ATCTATATTA GGAGGGAGGA AGAGTTTAGG GAGGAGAACT CATGGACGCT ATGAGCGTCT ACCTTCGTGC TCTAAATGAG AGTCGAAGAT GGTTATAGAG CTTGCTCTGA AGTACATGCT GACGCTTGGA TCAGCTAGTA AAGGGCCC |
CDS |
| >Mp1g26670.1 ATGCCAACTG AGGAGCTCCT CAGAGACCTT GACAGGCTCC GTAGCTGGCA TTCAGGGGGC CATGCAGGAG AAGTCGCTAC CTCCCGCAAG GACGTTAGTC GCTCAGTGAG TGTTCTACAG CTGGTGGAGT ACACAAAAAT GAAGCTCTCC GAAGCTCGTT CCAGCTCGTT GTCAGATGTG TTGCATTGGC ACCGACCGAT TCTCGCAAAG CAACAAGCTA TCGTACGACG AGTGTACACC CAAATATGCC GGAGTACATC ACTGTTGCAC ATTCGATTAA TTCAAGCAGA ACTGTCCAAG CGGCAGCACC AGATCAAAAG CTGCAGCTGC AAGATGGTAC ACTTCTGCGA GGGCTGCGGT TTTCCATGCG AAGTCTAG |
Protein |
| >Mp1g26670.1 MPTEELLRDL DRLRSWHSGG HAGEVATSRK DVSRSVSVLQ LVEYTKMKLS EARSSSLSDV LHWHRPILAK QQAIVRRVYT QICRSTSLLH IRLIQAELSK RQHQIKSCSC KMVHFCEGCG FPCEV |