Mp7g09490



Description

Annotation

Database ID Description
KEGG K16221 transcription factor TCP21 (protein CCA1 HIKING EXPEDITION)
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR31072 TRANSCRIPTION FACTOR TCP4-RELATED
Pfam PF03634 TCP family transcription factor
ProSiteProfiles PS51369 TCP domain profile.
GO GO:0043565 sequence-specific DNA binding
GO GO:0003700 DNA-binding transcription factor activity
GO GO:0005634 nucleus
MapolyID Mapoly0068s0102 -

Nomenclature

Gene symbol Product Transcript ID Status
MpTCP1 bHLH transcription factor Published

Associated Literature (AI-based literature mining)

Marchantia TCP transcription factor. ChIP showed MpTCP1 binding enriched around TSS; in a tcp1 mutant the spatial aggregation of TCP1-distal-targeted histone-modified regions was lost (dispersed), paralleling the pll2 mutant, indicating MpPLL/MpTCP1 cooperate in spatial chromatin congregation. MpTCP1 also interacts with MpPLL1/MpPLL2 by Y2H. ID NOTE: the paper's accession list prints "MpTCP1, Mp7g01530", but Mp7g01530 (Mapoly0099s0028) is a TCP-1/cpn60 chaperonin (CCT1; Pfam PF00118, KEGG K09493) and cannot be a TSS-binding transcription factor. The TCP transcription factor MpTCP1 is Mp7g09490 (Mapoly0068s0102; Pfam PF03634), the locus registered in MarpolBase and used by Busch et al. 2019 / Karaaslan et al. 2020. Curated here to Mp7g09490; the paper's printed ID is almost certainly a lookup hit on the chaperonin's "TCP-1" product name.

3 core 7 peripheral

Song M, Wang Y, Ma T, Terzaghi W, He K, Wang H, Xu B, Jing Y, Lin R, Deng XW, Zhu D, Wang Y. (2025) · Nucleic acids research  research experimental subject
Marchantia TCP transcription factor. ChIP showed MpTCP1 binding enriched around TSS; in a tcp1 mutant the spatial aggregation of TCP1-distal-targeted histone-modified regions was lost (dispersed), paralleling the pll2 mutant, indicating MpPLL/MpTCP1 cooperate in spatial chromatin congregation. MpTCP1 also interacts with MpPLL1/MpPLL2 by Y2H. ID NOTE: the paper's accession list prints "MpTCP1, Mp7g01530", but Mp7g01530 (Mapoly0099s0028) is a TCP-1/cpn60 chaperonin (CCT1; Pfam PF00118, KEGG K09493) and cannot be a TSS-binding transcription factor. The TCP transcription factor MpTCP1 is Mp7g09490 (Mapoly0068s0102; Pfam PF03634), the locus registered in MarpolBase and used by Busch et al. 2019 / Karaaslan et al. 2020. Curated here to Mp7g09490; the paper's printed ID is almost certainly a lookup hit on the chaperonin's "TCP-1" product name.
Karaaslan, E. S. h., et al. (2020) · Nature Plants  research experimental subject
TCP transcription factor (class I); its transcriptional activity correlates with three-dimensional chromatin (TAD-like) organization. Mptcp1 mutant analyzed; TCP1 binding linked to chromatin architecture.
Busch, A., et al. (2019) · New Phytologist  research experimental subject
Class I (TCP-P) TCP transcription factor; controls cell proliferation and redox processes. A redox-sensitive cysteine (C131) is required; Mptcp1 loss alters proliferation.
Kock C, Helmig J, Gutsche N, Dierschke T, Müller-Schüssele SJ, Zachgo S. (2025) · The Plant journal : for cell and molecular biology  research citation comparator
Cited as a redox-related bHLH transcription factor whose mutants show elevated H2O2, supporting the role of ROS in M. polymorpha growth.
Wang, N., et al. (2021b) · Frontiers in Plant Science  research citation tool
Cited only as the methodological basis for the ChIP protocol applied to MpNMCP.

Transcript models

Transcript ID Location Sequences Extract region
Mp7g09490.1 chr7:12413574..12418200 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp7g09490 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp7g09490 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.