Mp3g23400



Description

Annotation

Database ID Description
PRINTS PR00315 GTP-binding elongation factor signature
ProSiteProfiles PS51722 Translational (tr)-type guanine nucleotide-binding (G) domain profile.
Pfam PF00009 Elongation factor Tu GTP binding domain
Hamap MF_00118_A Elongation factor Tu [tuf].
FunFam G3DSA:3.40.50.300:FF:000255 Elongation factor 1-alpha
PANTHER PTHR23115 TRANSLATION FACTOR
CDD cd01883 EF1_alpha
ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature.
FunFam G3DSA:2.40.30.10:FF:000003 Elongation factor 1-alpha
Pfam PF03143 Elongation factor Tu C-terminal domain
NCBIfam TIGR00483 translation elongation factor EF-1 subunit alpha
CDD cd03705 EF1_alpha_III
Gene3D G3DSA:3.40.50.300 -
SUPERFAMILY SSF50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
Gene3D G3DSA:2.40.30.10 Translation factors
CDD cd03693 EF1_alpha_II
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
FunFam G3DSA:2.40.30.10:FF:000005 Elongation factor 1-alpha
SUPERFAMILY SSF50447 Translation proteins
Pfam PF03144 Elongation factor Tu domain 2
KEGG K03231 elongation factor 1-alpha
KOG KOG0052 Translation elongation factor EF-1 alpha/Tu; [J]
MapolyID Mapoly0024s0116 -

Nomenclature

Gene symbol Product Transcript ID Status
MpEF1 Housekeeping Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp3g23400.1 chr3:26594189..26596642 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp3g23400.2 chr3:26594189..26596363 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.